>AGAP006678-PA gnl|CDD|36052 KOG0834, KOG0834, KOG0834, CDK9 kinase-activating ... 286 1e-077 gnl|CDD|36053 KOG0835, KOG0835, KOG0835, Cyclin L [General funct... 130 2e-030 gnl|CDD|36013 KOG0794, KOG0794, KOG0794, CDK8 kinase-activating ... 102 4e-022 gnl|CDD|38804 KOG3598, KOG3598, KOG3598, Thyroid hormone recepto... 74 1e-013 gnl|CDD|37195 KOG1984, KOG1984, KOG1984, Vesicle coat complex CO... 56 3e-008 gnl|CDD|38769 KOG3561, KOG3561, KOG3561, Aryl-hydrocarbon recept... 54 2e-007 gnl|CDD|35828 KOG0608, KOG0608, KOG0608, Warts/lats-like serine ... 49 4e-006 gnl|CDD|36174 KOG0956, KOG0956, KOG0956, PHD finger protein AF10... 46 3e-005 gnl|CDD|39983 KOG4786, KOG4786, KOG4786, Ubinuclein, nuclear pro... 42 6e-004 gnl|CDD|39475 KOG4274, KOG4274, KOG4274, Positive cofactor 2 (PC... 40 0.002 ==> gnl|CDD|36052 KOG0834, KOG0834, KOG0834, CDK9 kinase-activating protein cyclin T [Cell cycle control, cell division, chromosome partitioning]. Length = 323 Score = 286 bits (734), Expect = 1e-077 Identities = 126/319 (39%), Positives = 174/319 (54%), Gaps = 16/319 (5%) Query: 13 SKNDDSKWYFTAEQL-ANSPSRKAGMDADQELMYRQRAANLIQDMGQRLQVSQLCINTAI 71 + S+WYF+ EQL N+PSR+ G+D +EL RQ A IQ++G RL++ Q I TAI Sbjct: 5 RPGETSRWYFSKEQLEENTPSRRDGIDLKKELRLRQEGAKFIQELGVRLKMPQKTIATAI 64 Query: 72 VYMHRFYAFHSFTQFHRNSIAAAALFLAAKVEEQPRKLEHIIKVVHISLGMEAPDPLRES 131 V HRFY FHSF +F ++AA+ LFLA KVEE PRKLE IIKV + L L E Sbjct: 65 VIFHRFYMFHSFKKFDPYTVAASCLFLAGKVEETPRKLEDIIKVSYRYLN-PKDLELEEV 123 Query: 132 YAEQAQDLVFNENVLLQTLGFDVAIDHPHTHVVKTCHLVKASKDLAQTSYFMAS---NSL 188 Y E + +V E +LL+TLGFD+ ++HP+ +++K +KA ++L Q A N Sbjct: 124 YWELKERIVQLELLLLETLGFDLNVEHPYKYLLKYLKKLKADENLKQPLAQAAWNFVNDS 183 Query: 189 HLTTMCLQYKPTVVACFCIHLACKWSRWEIPQSNEGRHWFHYVDKTVTLDLLKQLTDEFL 248 TT+CLQY P +A CIHLA K E+P S+ + W+ D+TVT +LL + EFL Sbjct: 184 LRTTLCLQYSPHSIAVACIHLAAKLLGVELP-SDTDKRWWREFDETVTNELLDDICHEFL 242 Query: 249 HIFDRCPTRLKSKMKSIR---ADSGAEESGRRTGGSSSSSNSLMAAPSSSSVPRGLDEAS 305 ++++ P R + + R SS NS S R Sbjct: 243 DLYEQTPQRNHLLLNVEAVVELSKAKPGNVRPRIPSSRDPNSSE----RLSDTRV---NG 295 Query: 306 TGSSSASSHHRPKQGSSSD 324 + SSS+SS+HR SSS Sbjct: 296 SKSSSSSSNHRSPHASSSS 314 ==> gnl|CDD|36053 KOG0835, KOG0835, KOG0835, Cyclin L [General function prediction only]. Length = 367 Score = 130 bits (327), Expect = 2e-030 Identities = 101/393 (25%), Positives = 156/393 (39%), Gaps = 43/393 (10%) Query: 25 EQLANSPSRKAGMDADQELMYRQRAANLIQDMGQRLQVSQLCINTAIVYMHRFYAFHSFT 84 E++ ++PS + G+ + E R LIQ+ G L + Q+ + T V RF SF Sbjct: 2 EKIDSTPSLQDGLSLETEEELRILGCELIQEAGILLNLPQVAMATGQVLFQRFCYSKSFV 61 Query: 85 QFHRNSIAAAALFLAAKVEEQPRKLEHIIKVVH-----ISLGMEAPDPLRESYAEQAQDL 139 + + A + LA+K+EE+PR++ +I V H L Y + Sbjct: 62 RHDFEIVVMACVLLASKIEEEPRRIRDVINVFHYLEQRRESEAAEHLILARLYINLKMQV 121 Query: 140 VFNENVLLQTLGFDVAIDHPHTHVVKTCHLVK--ASKDLAQTSYFMASNSLHLTTMCLQY 197 + E +L+ LGFDV ++HPH ++ ++ + L Q ++ ++SL T + ++Y Sbjct: 122 IRAERRILRELGFDVHVEHPHKLIIMYLQTLQLPPNLKLLQAAWNFMNDSLR-TDVFVRY 180 Query: 198 KPTVVACFCIHLACKWSRWEIPQSNEGRHWFHYVDKTVTLDLLKQLTDEFLHIFDRCPTR 257 P +AC CI+LA + +P HWF D T K+ DE + R Sbjct: 181 SPESIACACIYLAARNLEIPLPFQP---HWFKAFDTT------KREIDEICYRLIPLYKR 231 Query: 258 LKSKMKSIRADSGAEESGRRTGGSSSSSNSLMAAPSSSSVPRGLDEASTGSSSASSHHRP 317 K I A + S +S + A S+S + G A SS S++ Sbjct: 232 AKPDETLIE----AFVDRLKRKFSDASGKAKGANDSASLLG-GFAPAVDPSSPVSANKDS 286 Query: 318 KQGSSSDMMKPHGMSSSGS----HQKIPSSSSSSASSRSRSDRPPSASGTLAGQPQQQPP 373 K K S SS S SSRSRS + Sbjct: 287 KPSPVRTKHKKRPESRKSKSESPSNGRRKDSSRSRSSRSRSRSRD------------RSK 334 Query: 374 PPSQHYG-----SGSSSNSSSSTSSKGPMSSHR 401 S+H SG S+ S S S+ P SHR Sbjct: 335 KRSRHRSRSRSRSGRDSSRSRSERSELPRRSHR 367 Score = 40.4 bits (94), Expect = 0.002 Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 8/105 (7%) Query: 1015 AQMGDAPAAATATAPPTAALA--PASADVAAQQQQQPAATASTASDPDTDTGGHRSKSEK 1072 A A +A+ A A P+S A + + P++ S S Sbjct: 253 ASGKAKGANDSASLLGGFAPAVDPSSPVSANKDSKPSPVRTKHKKRPESRKSKSESPSNG 312 Query: 1073 KKKKEKHKHKEKDKTKDRDREEKKKHKKDKDKHRDRERDREKGDH 1117 ++K + +++ RDR K + +HR R R R D Sbjct: 313 RRKDSSRSRSSRSRSRSRDRS------KKRSRHRSRSRSRSGRDS 351 ==> gnl|CDD|36013 KOG0794, KOG0794, KOG0794, CDK8 kinase-activating protein cyclin C [Transcription]. Length = 264 Score = 102 bits (255), Expect = 4e-022 Identities = 67/256 (26%), Positives = 118/256 (46%), Gaps = 25/256 (9%) Query: 19 KWYFTAEQLAN-SPSRKAGMDADQELMYRQRAANLIQDMGQRLQVSQLCINTAIVYMHRF 77 +W +L G+ D+ + AN+IQ +GQ L++ Q I TAIVY RF Sbjct: 13 QWLLDKTELLKERQLDLRGLSEDEYSKLKIFMANVIQKLGQHLKLRQRVIATAIVYFRRF 72 Query: 78 YAFHSFTQFHRNSIAAAALFLAAKVEEQPRKLEHIIKVVHIS-LGMEAPD-PLRESYAEQ 135 Y S + +A L+LA KVEE P +VHI L EA R SY + Sbjct: 73 YLRKSLKEIEPRLLAPTCLYLACKVEECP--------IVHIRLLVNEAKVLKTRFSYWPE 124 Query: 136 A-----QDLVFNENVLLQTLGFDVAIDHPHTHVVKTCH-LVKASKDLAQTSYFMASNSLH 189 +D++ E LL+ L + + HP+ +++ + + L Q ++ + ++S Sbjct: 125 KFPYERKDILEMEFYLLEALDCYLIVHHPYRSLLQFVQDMGINDQKLLQLAWSIVNDSYR 184 Query: 190 LTTMCLQYKPTVVACFCIHLACKWSRWEIPQSNEGRHWFHYVDKTVTLDLLKQLTDEFLH 249 +CL Y P +A C+++AC I + + + WF + +V ++ +K + E L Sbjct: 185 -MDLCLLYPPHQIALACLYIAC-----VIDEKDIPKAWF--AELSVDMEKVKDIVQEILK 236 Query: 250 IFDRCPTRLKSKMKSI 265 +++ + K+K + Sbjct: 237 LYELWKIFDEKKVKKL 252 ==> gnl|CDD|38804 KOG3598, KOG3598, KOG3598, Thyroid hormone receptor-associated protein complex, subunit TRAP230 [Transcription]. Length = 2220 Score = 74.4 bits (182), Expect = 1e-013 Identities = 72/379 (18%), Positives = 121/379 (31%), Gaps = 28/379 (7%) Query: 1070 SEKKKKKEKHKHKEKDKTKDRDREEKKKHKKDKDKHRDRERDREKGDHHAGATGAGPDGA 1129 E +K+E+ K+ E +K K+ +K + +K K +D+E++ EK A P Sbjct: 1795 KEAAEKEEESKNAEDEKNKNTAENKKDTKEGEKGKSKDKEKEGEK----EKCKRASPKDD 1850 Query: 1130 GAGHQGVGHSAPQD-------PPGPIKIKLNRAILPPSVDGVGLHGTGSAPSGGPANDGL 1182 + H D P + L P G G Sbjct: 1851 VTSEKNEHHPRASDAAAALNAPETNKGMDTQNQKLAP--------GGRRPDPRGRRKRNS 1902 Query: 1183 KIKIPKDRLSGSSSLPGGGGSAAAGGSSHGGGGGPSGGGVGGGGSASLKLKISKDKIEHY 1242 + R ++S +AAA S + G + +S+ + Sbjct: 1903 GARPTGPRAKRANSRADTAQAAAAPTSWNAPIANQQNPAAGHAQMRGQQPPMSQGSSDET 1962 Query: 1243 NISATSDGGGGG---TGGIGSGGAVGAAGLP--MGGPSAMGGPGGSGSKKKDKDRDKDRE 1297 + + + A AAGL MG S+M G + + Sbjct: 1963 KVHQRNPLNRKKLEKRNSLADASAAAAAGLQQAMGNTSSMPPSGPPMPMGQSMQSAGATQ 2022 Query: 1298 KSKSKSSSSSSSAEHGSRQNGGGGGSAASGNSSSKSSSKNLSTLQQPQQQQQQQQYGMYN 1357 + + + G QN GG + S + SS N + +P + Sbjct: 2023 QLQPMQKHQMGPSMSGMNQNMGGMNQSMSHQAPPPYSSTN--EMNRPLMNPYGGPHFAAP 2080 Query: 1358 ANQSMQATNAAMASMAGMVPGGGMHGGSYHQQPGFDY-LQQQQSVAALQQQQQQQQQQYY 1416 + T + M H QQ D ++Q+ A + Q++QQQ+ Y Sbjct: 2081 SGPVSSETRQQIMQQQ-MREKLAAHHQLVEQQKQRDAREREQREREAREHQERQQQEAYQ 2139 Query: 1417 SQYGQFGQQQQQQQFQQQM 1435 Q Q Q+QQ +Q Q M Sbjct: 2140 KQQQQQEQKQQIEQNNQIM 2158 Score = 45.1 bits (106), Expect = 7e-005 Identities = 62/419 (14%), Positives = 109/419 (26%), Gaps = 61/419 (14%) Query: 272 EESGRRTGGSSSSSNSLMAAPSSSSVPRGLDEASTGSSSASSHHRPKQGSSSDMMKPHGM 331 EE S + +++ + E G S K+ K Sbjct: 1793 EEKEAAEKEEESKNAEDEKNKNTAENKKDTKEGEKGKSKDKEKEGEKEKCKRASPKDDVT 1852 Query: 332 SSSGSHQKIPSSSSSSASSRSRS-----DRPPSASGTLAGQPQQQPPPPSQHYGSGSSSN 386 S H S ++++ ++ + A G P+ + S +G + Sbjct: 1853 SEKNEHHPRASDAAAALNAPETNKGMDTQNQKLAPGGRRPDPRGRRKRNSGARPTGPRAK 1912 Query: 387 SSSSTSSKGPMSSHRGSMQQPSSLQLNPSGAVP------SQRSGSGYQGHEGGSKSRQPS 440 ++S + ++ S P + Q NP A Q S E R P Sbjct: 1913 RANSRADTAQAAAAPTSWNAPIANQQNP--AAGHAQMRGQQPPMSQGSSDETKVHQRNPL 1970 Query: 441 SASGLLQ-QASGGAPAGSAGGSTASSGSSSSMHSGYNQMKADRHGSSGQKLPSKPPSSSS 499 + L + + A A +A G + G++SSM M P S Sbjct: 1971 NRKKLEKRNSLADASAAAAAGLQQAMGNTSSMPPSGPPM----------------PMGQS 2014 Query: 500 SSSSSGAAVGGPNYGTKQHPAPSSQPSS----SSLFSHPPSYNQSISGRTTNVPLADQQS 555 S+ P + P+ S + + SH S S N PL + Sbjct: 2015 MQSAGATQQLQPMQKHQMGPSMSGMNQNMGGMNQSMSHQAPPPYS-STNEMNRPLMNPYG 2073 Query: 556 A--TGGSSSSNSGGSNQPKPEPSTFRLLDESIGRLADPMQMCTPPKQSKPSSIFSPDWKD 613 S S + Q + L + Q ++ + + Sbjct: 2074 GPHFAAPSGPVSSETRQQIMQQQMREKLAAHHQLVEQQKQRDAREREQREREAREHQERQ 2133 Query: 614 SQTESLQNLPSGKSRSSGHYGNVASAGGAPADRLLKPPKGSPSGKKQQQQQQQQHHGMA 672 Q + + K Q Q+QQ+ Sbjct: 2134 QQEAYQKQQQ------------------------QQEQKQQIEQNNQIMQEQQREEAYQ 2168 Score = 41.6 bits (97), Expect = 9e-004 Identities = 51/268 (19%), Positives = 82/268 (30%), Gaps = 12/268 (4%) Query: 259 KSKMKSIRADSGAEESGRRTGGSSSSSNSLMAAPSSSSVPRGLDEASTGSSSASSHHRPK 318 K K K + E+ R + +S P +S L+ T + + + Sbjct: 1827 KGKSKDKEKEGEKEKCKRASPKDDVTSEKNEHHPRASDAAAALNAPETNKGMDTQNQKLA 1886 Query: 319 QGSSSDMMKPHGMSSSGSHQKIPSSSSSSASSRSRSD----RPPSASGTLAGQPQQQPPP 374 G P G S + + A+SR+ + P S + +A Q Sbjct: 1887 PGGRR--PDPRGRRKRNSGARPTGPRAKRANSRADTAQAAAAPTSWNAPIANQQNPAAGH 1944 Query: 375 PSQHYGSGSSSNSSSSTSSKGPMSSHRGSMQQPSSLQLNPSGAVPSQRSGSGYQGHEGGS 434 S SS H+ + L+ S A S + +G Q G + Sbjct: 1945 AQMRGQQPPMSQGSS-----DETKVHQRNPLNRKKLEKRNSLADASAAAAAGLQQAMGNT 1999 Query: 435 KSRQPSSASGLLQQASGGAPAGSAGGSTASSGSSSSMHSGYNQMKADRHGSSGQKLPSKP 494 S PS + Q+ A A SM G NQ + S + P Sbjct: 2000 SSMPPSGPPMPMGQSMQSAGATQQLQPMQKHQMGPSMS-GMNQNMGGMNQSMSHQAPPPY 2058 Query: 495 PSSSSSSSSSGAAVGGPNYGTKQHPAPS 522 S++ + GGP++ P S Sbjct: 2059 SSTNEMNRPLMNPYGGPHFAAPSGPVSS 2086 Score = 39.7 bits (92), Expect = 0.003 Identities = 42/233 (18%), Positives = 72/233 (30%), Gaps = 27/233 (11%) Query: 1282 GSGSKKKDKDRDKDREKSKSKSSS-----SSSSAEHGSRQNGGGGGSAASGNSSSKSSSK 1336 G K K KD++K+ EK K K +S +S EH R +AA+ N+ + Sbjct: 1823 KEGEKGKSKDKEKEGEKEKCKRASPKDDVTSEKNEHHPR----ASDAAAALNAPETNKGM 1878 Query: 1337 NLSTLQQPQQQQQQQQYGMYNANQSMQATN--AAMASMAGMVPGGGMHGGSYH------Q 1388 + + ++ G N + T A A+ S++ Q Sbjct: 1879 DTQNQKLAPGGRRPDPRGRRKRNSGARPTGPRAKRANSRADTAQAAAAPTSWNAPIANQQ 1938 Query: 1389 QPGFDYLQQQQSVAALQQQQQQQQ---QQYYSQYGQFGQQQQQQQFQQQMAASGPGSMLL 1445 P + Q + QQ Q + +++ ++ AS + L Sbjct: 1939 NPAAGHAQMRG------QQPPMSQGSSDETKVHQRNPLNRKKLEKRNSLADASAAAAAGL 1992 Query: 1446 NASSGPAGMLGKLPGQPGGGGGGSTGGLQPSALPPYYYGGGSGTGTATNQGAG 1498 + G + G P G L P + + NQ G Sbjct: 1993 QQAMGNTSSM-PPSGPPMPMGQSMQSAGATQQLQPMQKHQMGPSMSGMNQNMG 2044 Score = 33.5 bits (76), Expect = 0.22 Identities = 23/123 (18%), Positives = 31/123 (25%), Gaps = 6/123 (4%) Query: 1327 GNSSSKSSSKNLSTLQQPQQQQQQQQYGMYNANQSMQATNAAMASMAGMVPGGG--MHGG 1384 N +L+ QQ G SM + M M G Sbjct: 1970 LNRKKLEKRNSLADASAAAAAGLQQAMGN---TSSMPPSGPPMPMGQSMQSAGATQQLQP 2026 Query: 1385 SYHQQPGFDYLQQQQSVAALQQQQQQQQQQYYSQYGQFGQQQQQQQFQQQMAA-SGPGSM 1443 Q G Q++ + Q Q YS + + AA SGP S Sbjct: 2027 MQKHQMGPSMSGMNQNMGGMNQSMSHQAPPPYSSTNEMNRPLMNPYGGPHFAAPSGPVSS 2086 Query: 1444 LLN 1446 Sbjct: 2087 ETR 2089 Score = 31.6 bits (71), Expect = 0.89 Identities = 30/191 (15%), Positives = 56/191 (29%), Gaps = 26/191 (13%) Query: 659 KQQQQQQQQHHGMAGSRS--DGQKKDRRMDGSVGGLAGQQPPASSKHQPMGHDKKSLGPP 716 + + QQ G + +R+ LA A++ Q + S+ P Sbjct: 1946 QMRGQQPPMSQGSSDETKVHQRNPLNRKKLEKRNSLADASAAAAAGLQQAMGNTSSMPPS 2005 Query: 717 SSSLPM------VGGTTNLSSTGSNN--GSSSNNSHTSHNLKRALDGTAMPPHQDPSGPL 768 +PM G T L + S S + + +++ A PP+ + Sbjct: 2006 GPPMPMGQSMQSAGATQQLQPMQKHQMGPSMSGMNQNMGGMNQSMSHQAPPPYSSTNEMN 2065 Query: 769 GSLTGNGGNTHSSGNAGGGGGLLSSQAKRPHPSNEQ----------------IRQDDGTD 812 L G H + +G Q + + R+ + Sbjct: 2066 RPLMNPYGGPHFAAPSGPVSSETRQQIMQQQMREKLAAHHQLVEQQKQRDAREREQRERE 2125 Query: 813 FREQKVRRTAE 823 RE + R+ E Sbjct: 2126 AREHQERQQQE 2136 ==> gnl|CDD|37195 KOG1984, KOG1984, KOG1984, Vesicle coat complex COPII, subunit SFB3 [Intracellular trafficking, secretion, and vesicular transport]. Length = 1007 Score = 56.2 bits (135), Expect = 3e-008 Identities = 60/260 (23%), Positives = 83/260 (31%), Gaps = 20/260 (7%) Query: 359 SASGTLAGQPQQQPPPPSQHYGSGSSSNSSSSTSSKGPMSSHRGSMQQPS----SLQLNP 414 + G GQPQ PP+ + GS +S + S P +G+ + Q Sbjct: 1 MSQGVPPGQPQPNSGPPNFYGGSSNSLAQAMPNGSINPPPPMQGTGPRGPPPGAPPQQPQ 60 Query: 415 SGAVPSQRSGSGYQGHEGGSKSRQPSSASGLLQQASGGAPAGSAGGSTASSGSSSSMHSG 474 SG P R G G +AS Q + G P S G + GS SS + Sbjct: 61 SGQSPMARPPQRRPGPPPGVSQPNGFAASPSSQPSYPGRP--STPGGPQAGGSQSSFAAA 118 Query: 475 YNQMKADRHGSSGQKLPSKPPSSSSSSSSSGAAVGGPNYGTKQHPAPSS---QPSSSSLF 531 SG PS + S G GG + P P + Sbjct: 119 GPS------SGSGTGPPSGNSQGPAGPLSQGPPTGGFPQPSAFPPGPQGGGPPGPAMVPP 172 Query: 532 SHPPSYNQ--SISGRTTNVPLADQQSATGGSSSSNSGGSNQPKPEPSTFRLLDESIGRLA 589 S P +Q SG P Q + SG P+ S G + Sbjct: 173 SGPLMVSQPARASGMPPAFPPGAQMQPPPPGAPRPSGPGYFPQSFSS---GAPAPGGPGS 229 Query: 590 DPMQMCTPPKQSKPSSIFSP 609 P PP++ P++I SP Sbjct: 230 GPGPNQPPPQRLDPNAIPSP 249 Score = 40.7 bits (95), Expect = 0.001 Identities = 56/291 (19%), Positives = 84/291 (28%), Gaps = 22/291 (7%) Query: 293 SSSSVPRGLDEASTGSSSASSHHRPKQGSSSDMMKPHGMSSSGSHQKIPSSSSSSASSRS 352 S VP G + ++G + S + M ++ Q + Sbjct: 1 MSQGVPPGQPQPNSGPPNFYGGS---SNSLAQAMPNGSINPPPPMQGTGPRGPPPGAPPQ 57 Query: 353 RSDRPPSASGTLAGQPQQQPPPPSQHYGSGSSSNSSSSTSSKGPMSSHRGSMQQPSSLQL 412 + S PQ++P PP + S SS S S G Q S Q Sbjct: 58 QPQSGQSPMAR---PPQRRPGPPPGVSQPNGFAASPSSQPSYPGRPSTPGGPQAGGS-QS 113 Query: 413 NPSGAVPSQRSGSGYQGHEGGSKSRQPSSASGL--LQQASGGAPAGSAGGSTASSGSSSS 470 + + A PS SG+G + S Q S P GG + S Sbjct: 114 SFAAAGPSSGSGTGPPSGNSQGPAGPLSQGPPTGGFPQPSAFPPGPQGGGPPGPAMVPPS 173 Query: 471 MHSGYNQMKADRHGSSGQKLPSKPPSSSSSSSSSGAAVGGPNYGTKQHP--APSSQPSSS 528 +Q + PP+ + G P + + SS + Sbjct: 174 GPLMVSQ---------PARASGMPPAFPPGAQMQPPPPGAPRPSGPGYFPQSFSSGAPAP 224 Query: 529 SLFSHPPSYNQSISGR--TTNVPLADQQSATGGSSSSNSGGSNQPKPEPST 577 P NQ R +P Q S SS ++ QP P +T Sbjct: 225 GGPGSGPGPNQPPPQRLDPNAIPSPPQVSIEDDSSFRSTDTRAQPPPLVTT 275 Score = 40.7 bits (95), Expect = 0.002 Identities = 38/219 (17%), Positives = 57/219 (26%) Query: 279 GGSSSSSNSLMAAPSSSSVPRGLDEASTGSSSASSHHRPKQGSSSDMMKPHGMSSSGSHQ 338 GGSS+S M S + P G + +P+ G S P Sbjct: 21 GGSSNSLAQAMPNGSINPPPPMQGTGPRGPPPGAPPQQPQSGQSPMARPPQRRPGPPPGV 80 Query: 339 KIPSSSSSSASSRSRSDRPPSASGTLAGQPQQQPPPPSQHYGSGSSSNSSSSTSSKGPMS 398 P+ ++S SS+ PS G Q + + S ++ Sbjct: 81 SQPNGFAASPSSQPSYPGRPSTPGGPQAGGSQSSFAAAGPSSGSGTGPPSGNSQGPAGPL 140 Query: 399 SHRGSMQQPSSLQLNPSGAVPSQRSGSGYQGHEGGSKSRQPSSASGLLQQASGGAPAGSA 458 S P G G G QP+ ASG+ GA Sbjct: 141 SQGPPTGGFPQPSAFPPGPQGGGPPGPAMVPPSGPLMVSQPARASGMPPAFPPGAQMQPP 200 Query: 459 GGSTASSGSSSSMHSGYNQMKADRHGSSGQKLPSKPPSS 497 ++ G P++PP Sbjct: 201 PPGAPRPSGPGYFPQSFSSGAPAPGGPGSGPGPNQPPPQ 239 Score = 37.7 bits (87), Expect = 0.013 Identities = 37/146 (25%), Positives = 44/146 (30%), Gaps = 7/146 (4%) Query: 1343 QPQQQQQQQQYGMYNANQSMQATNAAMASMAGMVPGGGMHGGSYHQQPG--FDYLQQQQS 1400 Q G N MQ T G P G S +P S Sbjct: 23 SSNSLAQAMPNGSINPPPPMQGTGP-RGPPPGAPPQQPQSGQSPMARPPQRRPGPPPGVS 81 Query: 1401 VAALQQQQQQQQQQYYSQYGQFGQQQQQQQFQQQMAASGPGSMLLNASSGPAGMLGKLPG 1460 Q Y + G Q Q AA+GP S + +GP + P Sbjct: 82 QPNGFAASPSSQPSYPGRPSTPGGPQAGGS-QSSFAAAGPSS---GSGTGPPSGNSQGPA 137 Query: 1461 QPGGGGGGSTGGLQPSALPPYYYGGG 1486 P G + G QPSA PP GGG Sbjct: 138 GPLSQGPPTGGFPQPSAFPPGPQGGG 163 Score = 31.9 bits (72), Expect = 0.60 Identities = 36/162 (22%), Positives = 50/162 (30%), Gaps = 19/162 (11%) Query: 921 SLYGGT-SDPPPSSGSRTDVTDSKPLDTTGGSSAQPANETKPQLASMESLLGLPPTSAAS 979 S GG + SS + + G+S PA L+ G P SA Sbjct: 101 STPGGPQAGGSQSSFAAAGPSSGSGTGPPSGNSQGPA----GPLSQGPPTGGFPQPSAFP 156 Query: 980 GQQQLPTAAGGGGPNDATQPGAVPPSYPWVTTGNAAQMGDAPAAATATAPPTAALAPAS- 1038 Q GGGP P VPPS P + +Q A A P P Sbjct: 157 PGPQ------GGGPP---GPAMVPPSGPLM----VSQPARASGMPPAFPPGAQMQPPPPG 203 Query: 1039 ADVAAQQQQQPAATASTASDPDTDTGGHRSKSEKKKKKEKHK 1080 A + P + +S A P G ++ + + Sbjct: 204 APRPSGPGYFPQSFSSGAPAPGGPGSGPGPNQPPPQRLDPNA 245 ==> gnl|CDD|38769 KOG3561, KOG3561, KOG3561, Aryl-hydrocarbon receptor nuclear translocator [Transcription]. Length = 803 Score = 53.6 bits (128), Expect = 2e-007 Identities = 49/316 (15%), Positives = 83/316 (26%), Gaps = 14/316 (4%) Query: 273 ESGRRTGGSSSSSNSLMAAPSSSSVPRGLDEASTGSSSASSHHRPKQGSSSDMMKPHGMS 332 ++ + + +S ++ E S S PH Sbjct: 485 QAQQPMLQTIKDQDSQRQRNLQQNLQLQSSELEKIQEGLSL--SQIDNLQSSGQGPHPGL 542 Query: 333 SSGSHQKIPSSSSSSASSRSRSDRPPSASGTLAGQPQQQPPPPSQHYGSGSSSNSSSSTS 392 S Q + S A+G L+ +QH SSS S+ S Sbjct: 543 LFESDQLLAPDLQDIQQSSDAVKLTAVAAGQLSSGSSDGSVGSTQHMTPTSSSASALSQG 602 Query: 393 SKGPMSSHRGSMQQPSSLQLNPSGAVPSQRSGSGYQGHEGGSKSRQPSSASGL------- 445 + +S + S QL + S + G S+S S + Sbjct: 603 ADPSLSGV-LELSSLSQSQLTSPSSRTSLSLEPDLKAETGSSRSGDLQQLSSILDDSQAR 661 Query: 446 -LQQASGGAPAGSAGGSTASSGSSSSMHSGYNQMKADRH---GSSGQKLPSKPPSSSSSS 501 L+ + G A A S + SS S+ +G ++ A + G +K + Sbjct: 662 QLRFSQGQALTPQADPSCLALMSSPSLPTGRQKVAAQSQLDPQNQGPHPLTKSLPQQEAQ 721 Query: 502 SSSGAAVGGPNYGTKQHPAPSSQPSSSSLFSHPPSYNQSISGRTTNVPLADQQSATGGSS 561 S + P S+ S + QQ +T Sbjct: 722 QQSQHQQNQASQTQPSQAQQPQPPQSNLQQQAITSLHLKQQILPLLSQALQQQQSTLNLH 781 Query: 562 SSNSGGSNQPKPEPST 577 P +P Sbjct: 782 ELEMEAQPNPFGQPPR 797 Score = 44.7 bits (105), Expect = 8e-005 Identities = 55/338 (16%), Positives = 88/338 (26%), Gaps = 15/338 (4%) Query: 282 SSSSNSLMAAPSSSSVPRGLDEASTGSSSASSHHRPKQGSSSDMMKPHGMSSSGSHQK-I 340 + SS L + P S V + S + + Q +K + Q+ + Sbjct: 450 NKSSAYLFSNPGSDEVEYIVCTNSNVPTPSGMSQFQAQQPMLQTIKDQDSQRQRNLQQNL 509 Query: 341 PSSSSSSASSRSRSDRPPSASGTLAGQPQQ--------QPPPPSQHYGSGSSSNSSSSTS 392 SS + + +GQ Q P SS + Sbjct: 510 QLQSSELEKIQEGLSLSQIDNLQSSGQGPHPGLLFESDQLLAPDLQDIQQSSDAVKLTAV 569 Query: 393 SKGPMSSHRGSMQQPSSLQLNPSGAVPSQRSGSGYQ---GHEGGSKSRQPSSASGLLQQA 449 + G +SS S+ + P+ + S S G S Q S + + Sbjct: 570 AAGQLSSGSSDGSVGSTQHMTPTSSSASALSQGADPSLSGVLELSSLSQSQLTSPSSRTS 629 Query: 450 SGGAPAGSAGGSTASSGSSSSMHS--GYNQMKADRHGSSGQKLPSKPPSSSSSSSSSGAA 507 P A ++ SG + S +Q + R P PS + SS Sbjct: 630 LSLEPDLKAETGSSRSGDLQQLSSILDDSQARQLRFSQGQALTPQADPSCLALMSSPSLP 689 Query: 508 VGGPNYGTKQHPAPSSQPSSSSLFSHPPSYNQSISGRTTNVPLADQQSATGGSSSSNSGG 567 G + P +Q S P Q S N Q S S Sbjct: 690 TGRQKVAAQSQLDPQNQGPHPLTKSLPQQEAQQQSQHQQNQASQTQPSQAQQPQPPQSNL 749 Query: 568 SNQPKPEPSTFR-LLDESIGRLADPMQMCTPPKQSKPS 604 Q + +L L + + Sbjct: 750 QQQAITSLHLKQQILPLLSQALQQQQSTLNLHELEMEA 787 Score = 42.8 bits (100), Expect = 3e-004 Identities = 65/432 (15%), Positives = 117/432 (27%), Gaps = 31/432 (7%) Query: 280 GSSSSSNSLMAAPSSSSVPRGLDEASTGSSSASSHHRPKQGSSSDMMK------------ 327 SSS + +S++ + G SS S H S+ +K Sbjct: 377 RSSSDGSFTFVDQRASAILGYQPQELLGRSSYESSHPADSSPLSESLKQVQALSEQRSTL 436 Query: 328 -PHGMSSSGSHQKIPSSSSSSASSRSRSDRPPSASGTLAGQPQQQPPPPSQHYGSGSSSN 386 S +GS SS+ ++ S + + P +Q + + Sbjct: 437 LYRFRSKNGSSIPNKSSAYLFSNPGSDEVEYIVCTNSNVPTPSGMSQFQAQQPMLQTIKD 496 Query: 387 SSSSTSSKGPMSSHRGSMQQPSSLQLNPSGAVPSQRSGSGYQGHEGGSKSRQPSSASGLL 446 S + S + + + + +S +S Q + Sbjct: 497 QDSQRQRNLQQNLQLQSSELEKIQEGLSLSQIDNLQSSGQGPHPGLLFESDQLLAPDLQD 556 Query: 447 QQASGGAPAGSAGGSTASSGSSSSMHSGYNQMKADRHGSSGQKLPSKPPSSSSSSSSSGA 506 Q S A +A + S SS G Q S+ PS S S Sbjct: 557 IQQSSDAVKLTAVAAGQLSSGSSDGSVGSTQHMTPTSSSASALSQGADPSLSGVLELSSL 616 Query: 507 AVGGPNYGTKQHPAPSSQPSSSSLFSHPPSYNQSISGRTTNVPLADQQSATGGSSSSNSG 566 + +PSS+ S S S SG L+ + S Sbjct: 617 SQSQLT-------SPSSRTSLSLEPDLKAETGSSRSGDLQQ--LSSILDDSQARQLRFSQ 667 Query: 567 GS-NQPKPEPSTFRLLDESIGRLADPMQMCTPPKQSKPSSIFSPDWKDSQTESLQNLPSG 625 G P+ +PS L+ + ++ + + Sbjct: 668 GQALTPQADPSCLALMSSPS------LPTGRQKVAAQSQLDPQN--QGPHPLTKSLPQQE 719 Query: 626 KSRSSGHYGNVASAGGAPADRLLKPPKGSPSGKKQQQQQQQQHHGMAGSRSDGQKKDRRM 685 + S H N AS + +PP+ + + +Q S++ Q++ Sbjct: 720 AQQQSQHQQNQASQTQPSQAQQPQPPQSNLQQQAITSLHLKQQILPLLSQALQQQQSTLN 779 Query: 686 DGSVGGLAGQQP 697 + A P Sbjct: 780 LHELEMEAQPNP 791 Score = 40.5 bits (94), Expect = 0.002 Identities = 35/182 (19%), Positives = 60/182 (32%), Gaps = 2/182 (1%) Query: 1270 PMGGPSAMGGPGGSGSKKKDKDRDKDREKSKSKSSSSSSSAEHGS-RQNGGGGGSAASGN 1328 M S+ G+ + S+S+ +S SS GS+ SG+ Sbjct: 588 HMTPTSSSASALSQGADPSLSGVLELSSLSQSQLTSPSSRTSLSLEPDLKAETGSSRSGD 647 Query: 1329 SSSKSSSKNLSTLQQPQQQQQQQQYGMYNANQSMQATNAAMASMA-GMVPGGGMHGGSYH 1387 SS + S +Q + Q Q + + ++ ++ + + + + Sbjct: 648 LQQLSSILDDSQARQLRFSQGQALTPQADPSCLALMSSPSLPTGRQKVAAQSQLDPQNQG 707 Query: 1388 QQPGFDYLQQQQSVAALQQQQQQQQQQYYSQYGQFGQQQQQQQFQQQMAASGPGSMLLNA 1447 P L QQ++ Q QQ Q Q SQ Q Q Q Q + +L Sbjct: 708 PHPLTKSLPQQEAQQQSQHQQNQASQTQPSQAQQPQPPQSNLQQQAITSLHLKQQILPLL 767 Query: 1448 SS 1449 S Sbjct: 768 SQ 769 Score = 36.2 bits (83), Expect = 0.032 Identities = 67/433 (15%), Positives = 119/433 (27%), Gaps = 32/433 (7%) Query: 304 ASTGSSSASSHHRPKQGSSSDMMKPHGMSSSGSHQKIPSSSSSSASSRSRSDRPPSASGT 363 A + + R + + P SS + S SSS S + AS Sbjct: 338 AIGRLVVSYAEVRVPSRADMSIEGPRQQPSSPQSSEFISRSSSDGSF---TFVDQRASAI 394 Query: 364 LAGQPQQ-------QPPPPSQHYGSGSSSNSSSSTSSKGPMSSHRGSMQQPSSLQLNPSG 416 L QPQ+ + P+ S + S + +R + SS+ S Sbjct: 395 LGYQPQELLGRSSYESSHPADSSPLSESLKQVQALSEQRSTLLYRFRSKNGSSIPNKSSA 454 Query: 417 AVPSQRSGSGYQGHEGGSKSRQPSSASGLLQQASGGAPAGSAGGSTASSGSSSSMHSGYN 476 + S GS + + G A + N Sbjct: 455 YLFSNP----------GSDEVEYIVCTNSNVPTPSGMSQFQAQQPMLQTIKDQDSQRQRN 504 Query: 477 QMKADRHGSS-GQKLPSKPPSSSSSSSSSGAAVGGPNYGTK----QHPAPSSQPSSSSLF 531 + + SS +K+ S + S P + P SS Sbjct: 505 LQQNLQLQSSELEKIQEGLSLSQIDNLQSSGQGPHPGLLFESDQLLAPDLQDIQQSSDAV 564 Query: 532 SHPPSYNQSISGRTTNVPLADQQSATGGSS--SSNSGGSNQPKPEPSTFRLLDESIGRLA 589 +S +++ + Q T SS S+ S G++ L +S Sbjct: 565 KLTAVAAGQLSSGSSDGSVGSTQHMTPTSSSASALSQGADPSLSGVLELSSLSQSQLTSP 624 Query: 590 DPMQMCTPPKQSKPSSIFSPDWKDSQTESLQNLPSGKSRSSGHYGNVASAGGAPADRLLK 649 + K + S Q S+ + S + G + P+ L Sbjct: 625 SSRTSLSLEPDLKAETGSSRSGDLQQLSSILD-DSQARQLRFSQGQALTPQADPSCLALM 683 Query: 650 PPKGSPSGK----KQQQQQQQQHHGMAGSRSDGQKKDRRMDGSVGGLAGQQPPASSKHQP 705 P+G+ Q Q Q ++S Q++ ++ A Q P+ ++ Sbjct: 684 SSPSLPTGRQKVAAQSQLDPQNQGPHPLTKSLPQQEAQQQSQHQQNQASQTQPSQAQQPQ 743 Query: 706 MGHDKKSLGPPSS 718 +S Sbjct: 744 PPQSNLQQQAITS 756 ==> gnl|CDD|35828 KOG0608, KOG0608, KOG0608, Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]. Length = 1034 Score = 49.4 bits (117), Expect = 4e-006 Identities = 73/391 (18%), Positives = 111/391 (28%), Gaps = 57/391 (14%) Query: 263 KSIRADSGAEESGRRTGGSSSSSNSLMAAPSSSSVPRGLDEAS--TGSSSASSHHRPKQG 320 + D+ A E R+ + + PS + L G+ A P QG Sbjct: 184 RHFMMDTPANERVFRSPPPMVRNGNPSTTPSGPP-QQQLTPPKYYGGTEEAVRPPHPIQG 242 Query: 321 SSSDM------MKPHGMSSSGSHQKIPSSSSSSASSRSRSDRPPSASGTLAGQPQQQPPP 374 M M P+ SS P S+ SS S P +GT++ P P Sbjct: 243 YRYGMPPPPYPMSPNAQSSPSRQSPTPPQQSAYDSSPSNGRGTPVGTGTVSPPPATHLHP 302 Query: 375 PSQHYGSGSSSNSSSSTSSKGPMSSHRGSMQQPSSLQLNPSGAVPSQRSGSGYQGHEGGS 434 P + + + M H SM Q LQ P R+ +E + Sbjct: 303 PHPVVKAPGPNPT---------MLQHNKSMAQKPVLQSPPQPPPAPSRNSINTMLYELSA 353 Query: 435 KSRQPSSASGLLQQASGGAPAGSAGGSTASSGSSSSMHSGYNQMKADRHGSSGQKLPSKP 494 + Q A+ + ++ S + + + R S LPS Sbjct: 354 PNIQRWPAASMAKKQSSSVVGHEVPSKSPHTPT--------------RVNSFNNPLPSPS 399 Query: 495 PSSSSSSSSSGAAVGGPNYGTKQHPAPSSQPSSSSLFSHPPSYNQSISGRTTNVPLADQQ 554 S+ + T A QP S P +P Sbjct: 400 FIIGPSAPA-------ATTVTADTQADIQQPVKSKRVLRPEQQTAQQPLHPRWIPQPSDA 452 Query: 555 SATGGSSSSNSGGSNQPKPEPSTFRLLDESIGRLAD-PMQMCTPPKQSKPSSIFSP---D 610 N P P P F+ + I LA P + PP K I +P Sbjct: 453 --------------NHPDPRPILFKPRNLEITMLARAPSEQPPPPPYPKHLLINNPSEPP 498 Query: 611 WKDSQTESLQNLPSGKSRSSGHYGNVASAGG 641 K +N + + S G + + G Sbjct: 499 PKSVSAPIDRNSSNTPAESEGSKSSTGTDSG 529 Score = 39.0 bits (90), Expect = 0.005 Identities = 86/543 (15%), Positives = 149/543 (27%), Gaps = 64/543 (11%) Query: 277 RTGGSSSSSNSLMAAPSSSSVPRGLDEASTGSSSASSHHRPKQGSSSDMMKPHGMSSSGS 336 R ++ N + + L S +S+ +HH + + + G Sbjct: 2 RPATFPATPNGASSRQRLQEIREPLPFGSKPNSALDAHHNSSKNDTLTPDQIRAKPKFGP 61 Query: 337 HQK-----------IPSSSSSSASSRSRSDRPPSASGTLAGQ---------PQQQPPPPS 376 H+K + + SA S S S G + P + S Sbjct: 62 HRKALDEIRESLLPFANEAGLSAGSESNSQMLQGLVGAGNDRHMALGALATPNSRSIEAS 121 Query: 377 QHYGSGSS----SNSSSSTSSKGPMSSHRGSMQQPSSLQLNPSG-----AVPSQRSGSGY 427 S S + S+ ++ S G++ Q S + + G RSG+ Sbjct: 122 IETISKMSYMDPRSEQSNAAATTSTSPSSGAVSQSVSRRTSNEGGGHSFRAYHPRSGTPM 181 Query: 428 QG----HEGGSKSRQPSSASGLLQQASGGAPAGSAG--GSTASSGSSSSMHS--GYNQMK 479 G + + R S +++ + T + + + ++ Sbjct: 182 PGRHFMMDTPANERVFRSPPPMVRNGNPSTTPSGPPQQQLTPPKYYGGTEEAVRPPHPIQ 241 Query: 480 ADRHGSSGQKLPSKPPSSSSSSSSSGAAVGGPNYGTKQHPAPSSQPSSSSLFSHPPSYNQ 539 R+G P P + SS S S Y + + + ++ P ++ Sbjct: 242 GYRYGMPPPPYPMSPNAQSSPSRQSPTPPQQSAYDSSPSNGRGTPVGTGTVSPPPATHLH 301 Query: 540 SISGRTTNVPLADQQSATGGSSSSN--SGGSNQPKPEPSTFRLLDESIGRLADPMQ---- 593 S + QP P PS + A +Q Sbjct: 302 PPHPVVKAPGPNPTMLQHNKSMAQKPVLQSPPQPPPAPSRNSINTMLYELSAPNIQRWPA 361 Query: 594 MCTPPKQSKPSSIFSPDWKDSQTESLQNL-------PSGKSRSSGHYGNVASAGGAPADR 646 KQS K T + N PS S +A AD Sbjct: 362 ASMAKKQSSSVVGHEVPSKSPHTPTRVNSFNNPLPSPSFIIGPSAPAATTVTA-DTQADI 420 Query: 647 LLKPPKGSPSGKKQQQQQQQQHHGM----------AGSRSDGQKKDRRMDGSVGGLAGQQ 696 +P K + +QQ QQ H R K + +Q Sbjct: 421 -QQPVKSKRVLRPEQQTAQQPLHPRWIPQPSDANHPDPRPILFKPRNLEITMLARAPSEQ 479 Query: 697 PPASSKHQPMGHDKKSLGPPSSSLPMVGGTTNLSSTGSNNGSSSNNSHTSHNLKRALDGT 756 PP + + + S PP S N S+T + + S +++ T K Sbjct: 480 PPPPPYPKHLLINNPSEPPPKS--VSAPIDRNSSNTPAESEGSKSSTGTDSGTKCKKQIH 537 Query: 757 AMP 759 P Sbjct: 538 TSP 540 ==> gnl|CDD|36174 KOG0956, KOG0956, KOG0956, PHD finger protein AF10 [General function prediction only]. Length = 900 Score = 46.0 bits (108), Expect = 3e-005 Identities = 68/304 (22%), Positives = 110/304 (36%), Gaps = 25/304 (8%) Query: 264 SIRADSGAEESGRRTG-GSSSSSNSLMAAPSSSSVPRGLDEASTGSSSASSHHRPKQGSS 322 S + SGA S R G SSS+S + + S S+ +SS+SS S Sbjct: 258 SAGSASGAVVSESREAKGKKSSSHSFVPKGTKFSSGLTTSSTSSAASSSSSPSSISGSS- 316 Query: 323 SDMMKPHGMSSSGSHQKIPSSSSSSASSRSRSDRPPSASGTLAGQPQQQPPPPSQHYGSG 382 +SSSGS +PSS+ SA + S P +G+ + + P + + Sbjct: 317 --------LSSSGS--SLPSSADFSAF--TASATPNMDNGSSSSPSASEVPVGTHGFQQL 364 Query: 383 SSSNSSSSTSSKGPMSSHRGSMQQPSSLQLNPSGAVPSQRSGSGYQGHEGGSKSRQPSSA 442 +++++ SS+ + P L+ S + PS S + + E K + S A Sbjct: 365 QIQSATAAASSQ--------NQIGPGDLK---SSSYPSASSLTSFMEEETKEKKNKTSKA 413 Query: 443 SGLLQQASGGAPAGSAGGSTASSGSSSSMHSGYNQMKADRHGSSGQKLPSKPPSSSSSSS 502 S G+ G S+AS SS++ +G R SG S SS+ Sbjct: 414 SKHGPGRPKGSLNGEGTESSASPTSSAASTAGLTTASRLRSPDSGSLASSGLGMMSSTHK 473 Query: 503 SSGAAVGGPNYGTKQHPAPSSQPSSSSLFSHPPSYNQSISGRTTNVPLADQQSATGGSSS 562 + S+SS SH + S+ + QS + Sbjct: 474 RPSGSAPTTPSVGSTLVLSGIYSSNSSGGSHSNASTPSMQSTPNSSAPLVSQSVSDLQRD 533 Query: 563 SNSG 566 S + Sbjct: 534 SVAD 537 Score = 45.6 bits (107), Expect = 5e-005 Identities = 60/325 (18%), Positives = 97/325 (29%), Gaps = 21/325 (6%) Query: 269 SGAEESGRRTGGSSSSSNSLMAAPSSSSVPRGLDEASTGSSSASSHHRPKQGSSSDMMKP 328 S ++S S + + ++ H+ S M+ P Sbjct: 182 SKLKKSPAIKVIPSYKPSQSASPSVQQLSHEKEKKSKKKKVLLKQKHKKPPEPSPHMLAP 241 Query: 329 HGMSSSGSHQKIPSSSSSSASSRSRSDRPPSASGTLAGQPQQQPPPPSQHYGSGSSS--- 385 +S S+ S+ ++S + A G + P G +SS Sbjct: 242 PLPITSNKVNNSLSAGSAGSASGAVVSESREAKGKKSSSHSFVPKGTKFSSGLTTSSTSS 301 Query: 386 ----NSSSSTSSKGPMSSHRGSMQQPSSLQLNPSGAVPSQRSGSGYQGHE----GGSKSR 437 +SS S+ S +SS S+ + + A P+ +GS G+ Sbjct: 302 AASSSSSPSSISGSSLSSSGSSLPSSADFSAFTASATPNMDNGSSSSPSASEVPVGTHGF 361 Query: 438 QPSSASGLLQQASG--GAPAGSAGGSTASSGSSSSMHSGYNQMKADRHGSSGQKLPSKPP 495 Q AS G S+ S SS + + S K P Sbjct: 362 QQLQIQSATAAASSQNQIGPGDLKSSSYPSASSLTSFMEEETKEKKNKTSKASKHGPGRP 421 Query: 496 --------SSSSSSSSSGAAVGGPNYGTKQHPAPSSQPSSSSLFSHPPSYNQSISGRTTN 547 + SS+S +S AA + +P S +SS S ++ SG Sbjct: 422 KGSLNGEGTESSASPTSSAASTAGLTTASRLRSPDSGSLASSGLGMMSSTHKRPSGSAPT 481 Query: 548 VPLADQQSATGGSSSSNSGGSNQPK 572 P G SSNS G + Sbjct: 482 TPSVGSTLVLSGIYSSNSSGGSHSN 506 Score = 41.7 bits (97), Expect = 8e-004 Identities = 114/688 (16%), Positives = 206/688 (29%), Gaps = 39/688 (5%) Query: 323 SDMMKPHGMSSSGSHQKIPSSSSSSASSRSRSDRPPSASGTLAGQPQQQPPPPSQHYGSG 382 S + K + S++ S+S S ++ L Q ++PP PS H + Sbjct: 182 SKLKKSPAIKVIPSYKPSQSASPSVQQLSHEKEKKSKKKKVLLKQKHKKPPEPSPHMLAP 241 Query: 383 SSSNSSSSTSSKGPMSSHRGSMQQPSSLQLNPSGAVPSQRSGSGYQGHEGGSKSRQPSSA 442 +S+ ++ S + S R G + + + Sbjct: 242 PLPITSNKVNNSLSAGSAGSASGAVVS----------ESREAKGKKSSSHSFVPKGTKFS 291 Query: 443 SGLLQQASGGAPAGSAGGSTASSGSSSSMHSGYNQMKADRHGSSGQKLPSKPPSSSSSSS 502 SGL ++ A + S S+ SS S SS+ S + + + S+ + + SSSS Sbjct: 292 SGLTTSSTSSAASSS---SSPSSISGSSLSSSGSSLPSSADFSAFTASATPNMDNGSSSS 348 Query: 503 SSGAAVGGPNYGTKQHPAPSSQPSSSSLFSHPPSYNQSISGRTTNVPLADQQSATGGSSS 562 S + V +G +Q S+ ++SS P +S S + + + + T + Sbjct: 349 PSASEVPVGTHGFQQLQIQSATAAASSQNQIGPGDLKSSSYPSASSLTSFMEEETKEKKN 408 Query: 563 SNSGGSNQPKPEPSTFRLLDESIGRLADPMQMCTPPKQSKPSSIFSPDWKDSQTESLQNL 622 S S P + + + + + S + SPD + L + Sbjct: 409 KTSKASKHGPGRPKGSLNGEGTESSASPTSSAASTAGLTTASRLRSPDSGSLASSGLGMM 468 Query: 623 PSGKSRSSGHYGNVASAGGAPADRLLKPPKGSPSGKKQQQQQQQQHHGMAGSRSDGQKKD 682 S R SG S G + S Q + + Q Sbjct: 469 SSTHKRPSGSAPTTPSVGSTLVLSGIYSSNSSGGSHSNASTPSMQSTPNSSAPLVSQSVS 528 Query: 683 RRMDGSVGGLAGQQPPASSKHQPMGHDKKSLGPPSSSLPMVGGTTNLSSTGSNNGSSSNN 742 SV A++ +LG + S+P + T S+N + Sbjct: 529 DLQRDSVADFTSALRSAAAAQSTTQTS--TLGGSNVSIP----AVHEVGTNSSNSTMHQL 582 Query: 743 SHTSHNLKRALDGTAMPPHQDPSGPLGSLTGNGGNTHSSGNAGGGGGLLSSQAKRPHPSN 802 + N + D + D G + G + S + +RP Sbjct: 583 IAQTENAPTSTDLQDGSSNND-----GRGSSPGTSLTSQSPRSSLPSFMDQLLERPWGQG 637 Query: 803 EQIRQDDGTDFREQKVRRTAEPSGSSF-----LPSSGSPSDQLFNSSFDLASTFDKMDDS 857 + EQ + + +F + + ++L + L+ F Sbjct: 638 SLLLMAPAHTSVEQLLECQFQLQSENFRLEEQISGLTAKKERLQALNSQLSVPFPLDVAK 697 Query: 858 SSLFNFNDPGSLLSQPLLSDSKPSTLAKSGGIFSNTINGIETNAALVSSLLKESLFNETP 917 G LL Q + DS P++ + + N + T+ +S + TP Sbjct: 698 RQ----RSDGLLLQQAIAHDSLPTSKSPKAEVSKQEDNSLPTSVPDPASSSSSLSEDSTP 753 Query: 918 KFGSLYGGTSDPPPSSGSRTDVTDSKPLDTTGGSSAQPANETKPQLASMESLLGLPPTSA 977 + + P + + + TT S P N + G Sbjct: 754 PPATYSRQSPANIPLTVPGSTAATA-LTTTTAASGGAPVNSNIQAHRATPGTAGALM--- 809 Query: 978 ASGQQQLPTAAGGGGPNDATQPGAVPPS 1005 G L T G N A P P Sbjct: 810 --GATPLMTNGTSGNLNGALSPERNPAL 835 Score = 34.4 bits (78), Expect = 0.11 Identities = 96/634 (15%), Positives = 177/634 (27%), Gaps = 55/634 (8%) Query: 450 SGGAPAGSAGGSTASSGSSSSMHSGYNQMKADRHGSSGQKLPSKPPSS-----------S 498 + ++ S S ++ K +K P P Sbjct: 191 KVIPSYKPSQSASPSVQQLSHEKEKKSKKKKVLLKQKHKKPPEPSPHMLAPPLPITSNKV 250 Query: 499 SSSSSSGAAVGGPNYGTKQHPAPSSQPSSSSLFSHPPSYNQSISGRTTNVPLADQQSATG 558 ++S S+G+A + + SSS F + S ++ A S+ Sbjct: 251 NNSLSAGSAGSASGAVVSESREAKGKKSSSHSFVPKGTKFSSGLTTSSTSSAASSSSSPS 310 Query: 559 GSSSSNSGGSNQPKPEPSTFRLLDESIGRLADPMQMCTPPKQSKPSSIFSPDWKDSQTES 618 S S+ S P + F S D +P P Q + Sbjct: 311 SISGSSLSSSGSSLPSSADFSAFTASATPNMDNGSSSSPSASEVPVGTHGF----QQLQI 366 Query: 619 LQNLPSGKSRSSGHYGNVASAGGAPADRLLKPPKGSPSGKKQQQQQQQQHHGMAGSRSDG 678 + S++ G++ S+ A L + KK + + +H S Sbjct: 367 QSATAAASSQNQIGPGDLKSSSYPSASSLTSFMEEETKEKKNKTSKASKHGPGRPKGSLN 426 Query: 679 QKKDRRMDGSVGGLAGQQPPASSKHQPM------------GHDKKSLGPPSSSLPMVGGT 726 + A ++ P S+ Sbjct: 427 GEGTESSASPTSSAASTAGLTTASRLRSPDSGSLASSGLGMMSSTHKRPSGSAPTTPSVG 486 Query: 727 TNLSSTGSNNGSSSNNSHTSHNLKRALDGTAMPPHQDPSGPLGSLTGNGGNTHSSGNAGG 786 + L +G + +SS SH++ + +M + S PL S + + A Sbjct: 487 STLVLSGIYSSNSSGGSHSNASTP------SMQSTPNSSAPLVSQSV--SDLQRDSVADF 538 Query: 787 GGGLLSSQAKRPHPSNEQIRQDDGTDFREQKV--RRTAEPSGSSFLPSSGSPSDQLF--N 842 L S+ A + + + + +V + + +P+ Sbjct: 539 TSALRSAAAAQSTTQTSTLGGSNVSIPAVHEVGTNSSNSTMHQLIAQTENAPTSTDLQDG 598 Query: 843 SSFDLASTFDKMDDSSSLFNFNDPGSLLSQPLLSDSKPSTLAKSGGIFSNTINGIETNAA 902 SS + +S + S + Q L +L ++ +E Sbjct: 599 SSNNDGRGSSPGTSLTSQSPRSSLPSFMDQLLERPWGQGSLLLMAPAHTSVEQLLECQFQ 658 Query: 903 LVSS--LLKESLFNETPK---FGSLYGGTSDPPPSSGSRTDVTDSKPLDTTGGSSAQPAN 957 L S L+E + T K +L S P P ++ +D L + P + Sbjct: 659 LQSENFRLEEQISGLTAKKERLQALNSQLSVPFPLDVAKRQRSDGLLLQQAIAHDSLPTS 718 Query: 958 ETKPQLASMESLLGLPPTSAASGQQQLPTAAGGGGPNDATQPGAVPPSYPWVTTGNAAQM 1017 ++ S + LP + P ++ D+T PP + A Sbjct: 719 KSPKAEVSKQEDNSLPTSV------PDPASSSSSLSEDST-----PPPATYSRQSPANIP 767 Query: 1018 GDAPAAATATAPPTAALAPASADVAAQQQQQPAA 1051 P + ATA T A A V + Q A Sbjct: 768 LTVPGSTAATALTTTTAASGGAPVNSNIQAHRAT 801 ==> gnl|CDD|39983 KOG4786, KOG4786, KOG4786, Ubinuclein, nuclear protein interacting with cellular and viral transcription factors [Transcription, Signal transduction mechanisms]. Length = 1136 Score = 42.2 bits (98), Expect = 6e-004 Identities = 47/211 (22%), Positives = 66/211 (31%), Gaps = 16/211 (7%) Query: 333 SSGSHQKIPSSSSSSASSRSRSDRPPSASGTLAGQPQQQPPPPSQHYGSGSSSNSSSSTS 392 S +K S + S+ R + + QPQ +Q S S N+ S +S Sbjct: 868 QKSSFEKTASLRGRTQSAPMRPGGDSTEMPNVTQQPQASQNHIAQSSNS-SQYNAPSGSS 926 Query: 393 SKGPMSSHRGSMQQPSSLQLNPSGAVPS------QRSGSGYQGH-EGGSKSRQPSSASGL 445 + + Q P Q S Q H + SS+ G+ Sbjct: 927 QQQHFPTEPSIRQPPPQSNQMLQRPRQQPQNQIVQNFQSAPQRHPHQNPQIATSSSSGGV 986 Query: 446 LQQASGGAPAGSAGGSTASSGSSSSMHSGYNQMKADRHGSSGQKLPSKPPSSSSSSSSSG 505 Q + G A A++ SS S Q + PS +SSS S+SS Sbjct: 987 NQFYNNGGAAPPVVEQQAANRRSSFTMSHSVQQHQSPLQQQFYQSPSHHNNSSSMSNSSL 1046 Query: 506 AAVGGPNYGTKQHPAPSSQPSSSSLFSHPPS 536 P PS S F PPS Sbjct: 1047 MQT--------PSPFPSHTSPMSQRFHTPPS 1069 Score = 38.3 bits (88), Expect = 0.009 Identities = 51/295 (17%), Positives = 85/295 (28%), Gaps = 21/295 (7%) Query: 279 GGSSSSSNSLMAAPSSSSVPRGLDEASTGSSSASSHHRPKQGSSSDMMKPHGMSSSGSHQ 338 G +S S + G S+ + + +S + + SS + Sbjct: 863 EGLDVQKSSFEKTASLRGRTQSAPMRPGGDSTEMPNVTQQPQASQNHIAQSSNSS-QYNA 921 Query: 339 KIPSSSSSSASSRSRSDRPPSASGTLAGQPQQQPPPPSQHYGSGSSSNSSSSTSSKGPMS 398 SS + +PP S + +P+QQP Q+ + ++ + P Sbjct: 922 PSGSSQQQHFPTEPSIRQPPPQSNQMLQRPRQQP----QNQIVQNFQSAPQRHPHQNPQI 977 Query: 399 SHRGSMQQPSSLQLNPSGAVPSQRSGSGYQGHEGGSKSRQPSSASGLLQQASGGAPAGSA 458 + S + N A P + + R + S +QQ +P Sbjct: 978 ATSSSSGGVNQFYNNGGAAPPVVEQQA--------ANRRSSFTMSHSVQQH--QSPLQQQ 1027 Query: 459 GGSTASSGSSSSMHSGYNQMKADRHGSSGQKLPSKPPSSSSSSSSSGAAVGGPNYGTKQH 518 + S ++SS S + M+ S P + S PN QH Sbjct: 1028 FYQSPSHHNNSSSMSNSSLMQTPSPFPS-HTSPMSQRFHTPPSVGHQMVQSQPNPSPLQH 1086 Query: 519 PAPSSQPSSSSLFSHPPSYNQSISGRTTNVPLADQQSATGGSSSSNSGGSNQPKP 573 +P S SS PP Q QQ + P P Sbjct: 1087 FSPHS--FSSQRPQMPPHQQQQPH---QTFSSQQQQLQQHQHQIHQMNTNYPPPP 1136 Score = 37.9 bits (87), Expect = 0.010 Identities = 61/342 (17%), Positives = 101/342 (29%), Gaps = 45/342 (13%) Query: 349 SSRSRSDRPPSASGTLAGQPQQQPPPPSQ----HYGSGSSSNSSSSTSSKGPMSSHRGSM 404 R + + PP Q +PP + + + + + S Sbjct: 813 LQRRQEEAPPPPPANHLQGIQVKPPVDHSLDILKEAEKGAHIIPTKSIKAEGLDVQKSSF 872 Query: 405 QQPSSLQLNPSGAVPSQRSGSGYQGHEGGSKSRQPSSASGLLQQASGGAPAGSAGGSTAS 464 ++ +SL G S G E + ++QP ++ + Q+S + + GS+ Sbjct: 873 EKTASL----RGRTQSAPMRPGGDSTEMPNVTQQPQASQNHIAQSSNSSQYNAPSGSSQQ 928 Query: 465 SG------------SSSSMHSGYNQMKADRHGSSGQKLPSKPPSSS---SSSSSSGAAVG 509 S+ M Q ++ + Q P + P + ++SSSSG Sbjct: 929 QHFPTEPSIRQPPPQSNQMLQRPRQQPQNQIVQNFQSAPQRHPHQNPQIATSSSSGGVNQ 988 Query: 510 GPNYGTKQHPAPSSQPSSSSLFSHPPSYNQSISGRTTNVPLADQQSATGGSSSSNSGGSN 569 N G P Q ++ Q SS SNS Sbjct: 989 FYNNGGAAPPVVEQQAANRRSSFTMSHSVQQHQSPLQQQFYQSPSHHNNSSSMSNSSLMQ 1048 Query: 570 QPKPEPSTFRLLDESIGRLADPMQMCTPPKQSKPSSIFSPDWKDSQTESLQNLPSGKSRS 629 P P PS + TPP P+ Q S + S + + Sbjct: 1049 TPSPFPSHT---------SPMSQRFHTPPSVGHQMVQSQPNPSPLQHFSPHSFSSQRPQM 1099 Query: 630 SGHYGNVASAGGAPADRLLKPPKGSPSGKKQQQQQQQQHHGM 671 H +P + S ++Q QQ Q Q H M Sbjct: 1100 PPHQQQ-------------QPHQTFSSQQQQLQQHQHQIHQM 1128 Score = 35.2 bits (80), Expect = 0.072 Identities = 36/182 (19%), Positives = 61/182 (33%), Gaps = 24/182 (13%) Query: 251 FDRCPTRLKSKMKSIRADSGAEESGRRTGGSSSSSNSLMAAPSSSSVPRGLDEASTGSSS 310 P ++M ++ A ++ +SS N+ + P S Sbjct: 885 APMRPGGDSTEMPNVTQQPQASQNHIAQSSNSSQYNAPSGSSQQQHFPTEPSIRQPPPQS 944 Query: 311 ASSHHRPKQGSSSDMMK---------PHG---MSSSGSHQKI----------PSSSSSSA 348 RP+Q + +++ PH +++S S + P A Sbjct: 945 NQMLQRPRQQPQNQIVQNFQSAPQRHPHQNPQIATSSSSGGVNQFYNNGGAAPPVVEQQA 1004 Query: 349 SSRSRSDRPPSASGTLAGQP-QQQPPPPSQHYGSGSSSNSSSSTSSKGPMSSHRGSMQQP 407 ++R RS S S P QQQ H+ + SS ++SS + P SH M Q Sbjct: 1005 ANR-RSSFTMSHSVQQHQSPLQQQFYQSPSHHNNSSSMSNSSLMQTPSPFPSHTSPMSQR 1063 Query: 408 SS 409 Sbjct: 1064 FH 1065 ==> gnl|CDD|39475 KOG4274, KOG4274, KOG4274, Positive cofactor 2 (PC2), subunit of a multiprotein coactivator of RNA polymerase II [Transcription]. Length = 742 Score = 40.1 bits (93), Expect = 0.002 Identities = 40/150 (26%), Positives = 55/150 (36%), Gaps = 3/150 (2%) Query: 1294 KDREKSKSKSSSSSSSAEHGSRQNGGGGGSAASGNSSSKSSSKNLSTLQQPQQQQQQQQY 1353 +D KS++S S NG GG+A G ++ ++L+ + Q Sbjct: 63 RDISNKKSQASVSQPMQALQPPTNGPAGGAAGIG-MPPRNPGQSLAGMGSSGAMGQPMSL 121 Query: 1354 GMYNA--NQSMQATNAAMASMAGMVPGGGMHGGSYHQQPGFDYLQQQQSVAALQQQQQQQ 1411 G + A+ S A + S Q QQQQ Q QQQQQ Sbjct: 122 GGQPPPGTSGTAPHSMAVVSTATPQTQLQLQPVSLQQGQQPQQFQQQQQAGLQQMQQQQQ 181 Query: 1412 QQQYYSQYGQFGQQQQQQQFQQQMAASGPG 1441 QQ+ +Q G QQ Q QQQ P Sbjct: 182 MQQFQAQQGAMNQQGQAVGQQQQQLQQQPQ 211 Score = 38.6 bits (89), Expect = 0.006 Identities = 22/75 (29%), Positives = 24/75 (32%), Gaps = 2/75 (2%) Query: 1342 QQPQQQQQQQQYGMYNANQSMQATN--AAMASMAGMVPGGGMHGGSYHQQPGFDYLQQQQ 1399 Q Q QQQQ Q Q S A P M ++ PG QQ Sbjct: 249 GQQQPQQQQGQPLRAQPPQQQPPMQQPQPPPSQALPQPLQQMGHTNHMGPPGDRPQPQQP 308 Query: 1400 SVAALQQQQQQQQQQ 1414 VA Q Q Q Q Sbjct: 309 PVAQNQPSQLPPQSQ 323 Score = 36.7 bits (84), Expect = 0.025 Identities = 51/223 (22%), Positives = 67/223 (30%), Gaps = 20/223 (8%) Query: 1258 IGSGGAVGAAGLPMGGPSAMGGPGGSGSKKKDKDRDKDREKSKSKSSSSSSSAEHGSRQN 1317 + G+ GA G PM PG SG+ + + S++ Q Sbjct: 106 LAGMGSSGAMGQPMS-LGGQPPPGTSGT-------------APHSMAVVSTATPQTQLQL 151 Query: 1318 GGGGGSAASGNSSSKSSSKNLSTLQQPQQQQQQQQYGMYNANQSMQATNAAMASMAGMVP 1377 + + Q QQQ QQ Q NQ QA + Sbjct: 152 QPVSLQQGQQPQQFQQQQQAGLQQMQQQQQMQQFQAQQGAMNQQGQAVGQQQQQLQQQPQ 211 Query: 1378 GGGMHGGSYHQQPGFDYLQQQQSVAALQQQQQQQQQQYYSQYGQFGQQQQQQQFQQQMAA 1437 G +HQ QQQQ + Q Q QQ QQ GQ QQQQ Q + Sbjct: 212 QQQHLIGLHHQNQQQIQQQQQQPQRPIAQLQLQQPQQ-----GQQQPQQQQGQPLRAQPP 266 Query: 1438 SGPGSMLLNASSGPAGMLGKLPGQPGGGGGGSTGGLQPSALPP 1480 M P+ L + Q G G +P P Sbjct: 267 QQQPPM-QQPQPPPSQALPQPLQQMGHTNHMGPPGDRPQPQQP 308