>AGAP007514-PA

gnl|CDD|38814 KOG3608, KOG3608, KOG3608, Zn finger proteins [Gen...    63   8e-011
gnl|CDD|38783 KOG3576, KOG3576, KOG3576, Ovo and related transcr...    62   1e-010
gnl|CDD|37673 KOG2462, KOG2462, KOG2462, C2H2-type Zn-finger pro...    59   1e-009
gnl|CDD|38829 KOG3623, KOG3623, KOG3623, Homeobox transcription ...    51   4e-007
gnl|CDD|39196 KOG3993, KOG3993, KOG3993, Transcription factor (c...    45   3e-005
gnl|CDD|36291 KOG1074, KOG1074, KOG1074, Transcriptional repress...    44   6e-005
gnl|CDD|37442 KOG2231, KOG2231, KOG2231, Predicted E3 ubiquitin ...    33   0.079
gnl|CDD|38787 KOG3580, KOG3580, KOG3580, Tight junction proteins...    32   0.21 
gnl|CDD|36361 KOG1146, KOG1146, KOG1146, Homeobox protein [Gener...    31   0.43 
gnl|CDD|35605 KOG0384, KOG0384, KOG0384, Chromodomain-helicase D...    30   0.60 


==> gnl|CDD|38814 KOG3608, KOG3608, KOG3608, Zn finger proteins [General function
           prediction only].
          Length = 467

 Score = 63.2 bits (153), Expect = 8e-011
 Identities = 48/203 (23%), Positives = 71/203 (34%), Gaps = 14/203 (6%)

Query: 311 CGKKFPFKKRLTVHMKKMHVEKDIICDQCQKPF-TKYTIEDHKR---SVHSARFVCEHCP 366
           C K    K RL  H++    EK + C  C + F TK  + DH R    +++  F C  C 
Sbjct: 185 CTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCF 244

Query: 367 KTFNSRFRLLQHMEEHDESLRNSTSVPCTICGQVMRDKYILTRHIKLMHTVQPAVSCETC 426
           K F +   L  H+  H    +      C +C         LT HI+  H+      C+ C
Sbjct: 245 KRFATEKLLKSHVVRHVNCYK------CPLCDMTCSSASSLTTHIRYRHSKDKPFKCDEC 298

Query: 427 GKTFKCKRNLSVHMTNVCMEPTRLYPCTICGKEFRRKNKLKEHMSTH---TGKPLYMCSF 483
                 + +L+ H+  V  +         C    R   +++ H           LY C  
Sbjct: 299 DTRCVRESDLAKHV-QVHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHC 357

Query: 484 CPETFRQDTHLYHHRKNAHYERW 506
           C   F     L  H    H  R 
Sbjct: 358 CDRFFTSGKSLSAHLMKKHGFRL 380



 Score = 56.6 bits (136), Expect = 8e-009
 Identities = 41/153 (26%), Positives = 60/153 (39%), Gaps = 14/153 (9%)

Query: 363 EHCPKTFNSRFRLLQHMEEH------DESLRNSTSVPCTICG-----QVMRDKYILTRHI 411
           E C + F S      H+ +H      D         P T+C      + M +KY L  HI
Sbjct: 140 EDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHI 199

Query: 412 KLMHTVQPAVSCETCGKTFKCKRNLSVHMTNVCMEPTRLYPCTICGKEFRRKNKLKEHMS 471
           +  H+ +  V+C  CG+ F+ K  L  H+       T  + C  C K F  +  LK H+ 
Sbjct: 200 R-THSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVV 258

Query: 472 THTGKPLYMCSFCPETFRQDTHLYHHRKNAHYE 504
            H     Y C  C  T    + L  H +  H +
Sbjct: 259 RHVNC--YKCPLCDMTCSSASSLTTHIRYRHSK 289



 Score = 45.1 bits (106), Expect = 2e-005
 Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 32/191 (16%)

Query: 232 FGTWRALLRHTKEVHKHDKVYVKCPVCEMKMRTKQTLLQHMDWHENPEKYRCELCG---E 288
           F T   L  H +   + +    +C  C  +  T++ L  H+  H N   Y+C LC     
Sbjct: 217 FRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN--CYKCPLCDMTCS 274

Query: 289 KHQNMKEHIQNKHQE-RQFCCDVCGKKFPFKKRLTVHMKKMHVEKDIICDQCQKPFTKYT 347
              ++  HI+ +H + + F CD C  +   +  L  H                       
Sbjct: 275 SASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKH----------------------- 311

Query: 348 IEDHKRSVHSARFVCEHCPKTFNSRFRLLQHMEEHDESLRNSTSVPCTICGQVMRDKYIL 407
           ++ H ++V+        C  +  +  ++ +H  E  E   N     C  C +       L
Sbjct: 312 VQVHSKTVYQCEH--PDCHYSVRTYTQMRRHFLEVHEG-NNPILYACHCCDRFFTSGKSL 368

Query: 408 TRHIKLMHTVQ 418
           + H+   H  +
Sbjct: 369 SAHLMKKHGFR 379



==> gnl|CDD|38783 KOG3576, KOG3576, KOG3576, Ovo and related transcription factors
           [Transcription].
          Length = 267

 Score = 62.5 bits (151), Expect = 1e-010
 Identities = 32/81 (39%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 422 SCETCGKTFKCKRNLSVHMTNVCMEPTRLYPCTICGKEFRRKNKLKEHMSTHTGKPLYMC 481
           +C  CGK F  +R L+ H+   C    + + CT CGK F     LK H  THTG   Y C
Sbjct: 119 TCRVCGKKFGLQRMLNRHLK--CHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKC 176

Query: 482 SFCPETFRQDTHLYHHRKNAH 502
           S C + F Q   L  H K  H
Sbjct: 177 SLCEKAFTQRCSLESHLKKVH 197



 Score = 48.2 bits (114), Expect = 2e-006
 Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 18/137 (13%)

Query: 249 DKVYVKCPVCEMKMRTKQTLLQHMDWHENPEKYRCELCGEKHQN---MKEHIQNKHQERQ 305
           D+    C VC  K   ++ L +H+  H + +++ C  CG+   +   +K H +     R 
Sbjct: 114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRP 173

Query: 306 FCCDVCGKKFPFKKRLTVHMKKMHVEKDIICDQCQKPFTKYTIEDHKRSVHSARFVCEHC 365
           + C +C K F  +  L  H+KK+H  +            +Y  ++ +  ++    VCE C
Sbjct: 174 YKCSLCEKAFTQRCSLESHLKKVHGVQ-----------HQYAYKERRAKLY----VCEDC 218

Query: 366 PKTFNSRFRLLQHMEEH 382
             T         H++ H
Sbjct: 219 GYTSERPEVYYLHLKLH 235



 Score = 47.5 bits (112), Expect = 4e-006
 Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 16/130 (12%)

Query: 385 SLRNSTSVPCTICGQVMRDKYILTRHIKLMHTVQPAVSCETCGKTFKCKRNLSVHM-TNV 443
           S  +  S  C +CG+    + +L RH+K    V+  + C  CGK F    +L  H  T+ 
Sbjct: 111 SSSDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHL-CTFCGKGFNDTFDLKRHTRTHT 169

Query: 444 CMEPTRLYPCTICGKEFRRKNKLKEHMSTHTGKP-----------LYMCSFCPETFRQDT 492
            + P   Y C++C K F ++  L+ H+    G             LY+C  C  T  +  
Sbjct: 170 GVRP---YKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPE 226

Query: 493 HLYHHRKNAH 502
             Y H K  H
Sbjct: 227 VYYLHLKLHH 236



 Score = 46.3 bits (109), Expect = 1e-005
 Identities = 36/125 (28%), Positives = 52/125 (41%), Gaps = 9/125 (7%)

Query: 306 FCCDVCGKKFPFKKRLTVHMKKMHVEKDIICDQCQKPFT-KYTIEDHKRSVHSAR-FVCE 363
           F C VCGKKF  ++ L  H+K     K  +C  C K F   + ++ H R+    R + C 
Sbjct: 118 FTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCS 177

Query: 364 HCPKTFNSRFRLLQHM-------EEHDESLRNSTSVPCTICGQVMRDKYILTRHIKLMHT 416
            C K F  R  L  H+        ++    R +    C  CG       +   H+KL H 
Sbjct: 178 LCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP 237

Query: 417 VQPAV 421
             PA+
Sbjct: 238 FSPAL 242



==> gnl|CDD|37673 KOG2462, KOG2462, KOG2462, C2H2-type Zn-finger protein
           [Transcription].
          Length = 279

 Score = 59.0 bits (142), Expect = 1e-009
 Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 6/143 (4%)

Query: 359 RFVCEHCPKTFNSRFRLLQHMEEHDESLRNSTSVPCTICGQVMRDKYILTRHIKLMHTVQ 418
           R+ C  C K++++   L +H + H  SL +  +  C  CG+V      L  HI   HT+ 
Sbjct: 130 RYKCPECGKSYSTSSNLSRHKQTH-RSLDSKKAFSCKYCGKVYVSMPALKMHI-RTHTLP 187

Query: 419 PAVSCETCGKTFKCKRNLSVHMTNVCMEPTRLYPCTICGKEFRRKNKLKEHMSTHTGKPL 478
               C  CGK F     L  H+     E  + + C  CGK F  ++ L+ HM TH+    
Sbjct: 188 --CECGICGKAFSRPWLLQGHIRTHTGE--KPFSCPHCGKAFADRSNLRAHMQTHSDVKK 243

Query: 479 YMCSFCPETFRQDTHLYHHRKNA 501
           + C  C ++F   ++L  H ++A
Sbjct: 244 HQCPRCGKSFALKSYLNKHSESA 266



 Score = 46.3 bits (109), Expect = 8e-006
 Identities = 49/206 (23%), Positives = 69/206 (33%), Gaps = 25/206 (12%)

Query: 142 PPIDLDPTAPSSDEDSAVPQGSRSDSSSPDRRKPKRERNPKRPQTSDNETKQSKVAAQKE 201
            PI       SS  +  +P  +  DSSS     P             ++T  S  A    
Sbjct: 69  LPISESNLLSSSIWELKMPGLAHEDSSSS---SPPSTTGGPIYVRVISKTVPSAEATAS- 124

Query: 202 EDESLHNFYKRIVCEVCDIQRMLVGEPQIDFGTWRALL-RHTKEVHKHDKVYVKCPVCEM 260
                   + R  C  C               T R+L  +         KVYV  P  +M
Sbjct: 125 -----AAKHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKM 179

Query: 261 KMRTKQTLLQHMDWHENPEKYRCELCGEKHQN---MKEHIQNKHQERQFCCDVCGKKFPF 317
            +RT          H  P +  C +CG+       ++ HI+    E+ F C  CGK F  
Sbjct: 180 HIRT----------HTLPCE--CGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFAD 227

Query: 318 KKRLTVHMKKMHVEKDIICDQCQKPF 343
           +  L  HM+     K   C +C K F
Sbjct: 228 RSNLRAHMQTHSDVKKHQCPRCGKSF 253



 Score = 46.3 bits (109), Expect = 9e-006
 Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 14/158 (8%)

Query: 294 KEHIQNKHQERQFCCDVCGKKFPFKKRLTVHMKKMHVEKDI----ICDQCQKPFTKY-TI 348
            E   +  +  ++ C  CGK +     L+ H K+ H   D      C  C K +     +
Sbjct: 119 AEATASAAKHPRYKCPECGKSYSTSSNLSRH-KQTHRSLDSKKAFSCKYCGKVYVSMPAL 177

Query: 349 EDHKRSVHSARFVCEHCPKTFNSRFRLLQ-HMEEHDESLRNSTSVPCTICGQVMRDKYIL 407
           + H R  H+    C  C K F SR  LLQ H+  H           C  CG+   D+  L
Sbjct: 178 KMHIR-THTLPCECGICGKAF-SRPWLLQGHIRTHT----GEKPFSCPHCGKAFADRSNL 231

Query: 408 TRHIKLMHTVQPAVSCETCGKTFKCKRNLSVHMTNVCM 445
             H++    V+    C  CGK+F  K  L+ H  + C+
Sbjct: 232 RAHMQTHSDVKK-HQCPRCGKSFALKSYLNKHSESACL 268



==> gnl|CDD|38829 KOG3623, KOG3623, KOG3623, Homeobox transcription factor SIP1
           [Transcription].
          Length = 1007

 Score = 51.0 bits (121), Expect = 4e-007
 Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 12/112 (10%)

Query: 389 STSVPCTICGQVMRDKYILTRHIKLMHTV-QPAVSCETCGKTFKCKRNLSVHMTNVCMEP 447
           S  + C  C +  +    L  HIK  H   +P  SC  C  TF  +  L  HM       
Sbjct: 208 SQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGG 267

Query: 448 T-----------RLYPCTICGKEFRRKNKLKEHMSTHTGKPLYMCSFCPETF 488
                       R + CT CGK F+ K+ LKEH+  H+G+  + C  C + F
Sbjct: 268 DQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRF 319



 Score = 48.3 bits (114), Expect = 2e-006
 Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 14/123 (11%)

Query: 224 LVGEPQIDFGTWR--ALLRHTKEVHKHDKVYVKCPVCEMKMRTKQTLLQHMDWHENPEKY 281
           L+  P  D G  R  +L  H K  H+ ++    C +C      +  L +HM  H+     
Sbjct: 210 LLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKP---- 265

Query: 282 RCELCGEKHQNMKEHIQNKHQERQFCCDVCGKKFPFKKRLTVHMKKMHVEKDIICDQCQK 341
                G++  ++ +        R+F C  CGK F FK  L  H++    EK   C  C+K
Sbjct: 266 ----GGDQAISLTQSALL----RKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKK 317

Query: 342 PFT 344
            F+
Sbjct: 318 RFS 320



 Score = 47.1 bits (111), Expect = 5e-006
 Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)

Query: 336 CDQCQKPFTKYTIEDHKRSVHSA---RFVCEHCPKTFNSRFRLLQHMEEHDESLRNSTSV 392
           CD+  K  T  ++++H +  H      F C  C  TF  R +L +HM+ H      + S+
Sbjct: 216 CDRGYKRLT--SLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISL 273

Query: 393 P---------CTICGQVMRDKYILTRHIKLMHTVQPAVSCETCGKTFKCKRNLSVHMTN 442
                     CT CG+  + K+ L  H+++ H+ +    C  C K F    + S HM++
Sbjct: 274 TQSALLRKFKCTECGKAFKFKHHLKEHLRI-HSGEKPFECPNCKKRFSHSGSYSSHMSS 331



 Score = 43.6 bits (102), Expect = 5e-005
 Identities = 16/54 (29%), Positives = 27/54 (50%)

Query: 446 EPTRLYPCTICGKEFRRKNKLKEHMSTHTGKPLYMCSFCPETFRQDTHLYHHRK 499
               +Y C  C K F++++ L  H   H+G+  Y C  C + F+   HL  H++
Sbjct: 890 TEDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKR 943



 Score = 43.6 bits (102), Expect = 5e-005
 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 5/92 (5%)

Query: 349 EDHKRSVHSARFVCEHCPKTFNSRFRLLQHMEEHDESLRNSTSVPCTICGQVMRDKYILT 408
           E          + C+ C K F  +  L +H  EH           C IC +  + K+ LT
Sbjct: 884 ETKHAKTEDGMYACDQCDKAFQKQSSLARHKYEHS----GQRPYQCIICKKAFKHKHHLT 939

Query: 409 RHIKLMHTVQPAVSCETCGKTFKCKRNLSVHM 440
            H +L H+ +    C+ C K F    + S HM
Sbjct: 940 EHKRL-HSGEKPFQCDKCLKRFSHSGSYSQHM 970



 Score = 43.6 bits (102), Expect = 6e-005
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)

Query: 422 SCETCGKTFKCKRNLSVHMTNVCMEPTRLYPCTICGKEFRRKNKLKEHMSTHTGKPLYMC 481
           +C+ C K F+ + +L+ H         R Y C IC K F+ K+ L EH   H+G+  + C
Sbjct: 896 ACDQCDKAFQKQSSLARHKYE--HSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQC 953

Query: 482 SFCPETF 488
             C + F
Sbjct: 954 DKCLKRF 960



 Score = 39.0 bits (90), Expect = 0.001
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 281 YRCELCGEKHQNMKEHIQNKHQ---ERQFCCDVCGKKFPFKKRLTVHMKKMHVEKDIICD 337
           Y C+ C +  Q      ++K++   +R + C +C K F  K  LT H +    EK   CD
Sbjct: 895 YACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCD 954

Query: 338 QCQKPFT 344
           +C K F+
Sbjct: 955 KCLKRFS 961



 Score = 37.9 bits (87), Expect = 0.003
 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 3/78 (3%)

Query: 394 CTICGQVMRDKYILTRHIKLMHTVQPAVSCETCGKTFKCKRNLSVHMTNVCMEPTRLYPC 453
           C  C +  + +  L RH K  H+ Q    C  C K FK K +L+ H      E  + + C
Sbjct: 897 CDQCDKAFQKQSSLARH-KYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGE--KPFQC 953

Query: 454 TICGKEFRRKNKLKEHMS 471
             C K F       +HM+
Sbjct: 954 DKCLKRFSHSGSYSQHMN 971



 Score = 37.1 bits (85), Expect = 0.006
 Identities = 23/157 (14%), Positives = 52/157 (33%), Gaps = 33/157 (21%)

Query: 151 PSSDEDSAVPQGSRSDSSSPDRRKPKRERNPKRPQTSDNETKQSKVAAQKEEDESLHNFY 210
            +  +D      S   +   D       +   +                 + ++ ++   
Sbjct: 854 SNGFQDERQDHSSEFGAGVLDPNDSDSGKAETKH---------------AKTEDGMY--- 895

Query: 211 KRIVCEVCDIQRMLVGEPQIDFGTWRALLRHTKEVHKHDKVYVKCPVCEMKMRTKQTLLQ 270
               C+ CD            F    +L RH  E H   + Y +C +C+   + K  L +
Sbjct: 896 ---ACDQCDKA----------FQKQSSLARHKYE-HSGQRPY-QCIICKKAFKHKHHLTE 940

Query: 271 HMDWHENPEKYRCELCGEKHQNMKEHIQNKHQERQFC 307
           H   H   + ++C+ C ++  +   + Q+ +    +C
Sbjct: 941 HKRLHSGEKPFQCDKCLKRFSHSGSYSQHMNHRYSYC 977



 Score = 36.7 bits (84), Expect = 0.007
 Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)

Query: 236 RALLRHTKEVHKHDKVYVKCPVCEMKMRTKQTLLQHMDWHENPEKYRCELCGE--KHQN- 292
            +    TK     D +Y  C  C+   + + +L +H   H     Y+C +C +  KH++ 
Sbjct: 879 DSGKAETKHAKTEDGMYA-CDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHH 937

Query: 293 MKEHIQNKHQERQFCCDVCGKKFPFKKRLTVHM 325
           + EH +    E+ F CD C K+F      + HM
Sbjct: 938 LTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHM 970



 Score = 32.5 bits (73), Expect = 0.13
 Identities = 20/78 (25%), Positives = 28/78 (35%), Gaps = 4/78 (5%)

Query: 309 DVCGKKFPFKKRLTVHMKKMHVEKDII--CDQCQKPFTKYTIEDHKRSVHSAR--FVCEH 364
              G   P          K    +D +  CDQC K F K +     +  HS +  + C  
Sbjct: 868 FGAGVLDPNDSDSGKAETKHAKTEDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCII 927

Query: 365 CPKTFNSRFRLLQHMEEH 382
           C K F  +  L +H   H
Sbjct: 928 CKKAFKHKHHLTEHKRLH 945



==> gnl|CDD|39196 KOG3993, KOG3993, KOG3993, Transcription factor (contains Zn
           finger) [Transcription].
          Length = 500

 Score = 44.7 bits (105), Expect = 3e-005
 Identities = 29/116 (25%), Positives = 41/116 (35%), Gaps = 32/116 (27%)

Query: 394 CTICGQVMRDKYILTRHIKLMHTVQPAVSCETCGKTFKCKRNLSVH-------------- 439
           C +C +   D + L +H +    V     C  C K F C  NL+ H              
Sbjct: 270 CQLCKEKYEDAFALAQH-RCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAG 328

Query: 440 ---------MTNVCMEPTR--------LYPCTICGKEFRRKNKLKEHMSTHTGKPL 478
                          E  R        ++ C  CGK+FRR+  L++H  TH   PL
Sbjct: 329 SPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPL 384



 Score = 39.4 bits (91), Expect = 0.001
 Identities = 31/192 (16%), Positives = 43/192 (22%), Gaps = 30/192 (15%)

Query: 254 KCPVCEMKMRTKQTLLQHMDWHE----------NPEKYRCELCGEKHQNMKEHIQNKHQE 303
           +CP C+        L  H  WH+           P K   E   E  +  +    +    
Sbjct: 297 RCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERS--GDDSSS 354

Query: 304 RQFCCDVCGKKFPFKKRLTVHMKKMHVEKD-----------------IICDQCQKPFTKY 346
             F C  CGKKF  +  L  H                                    +  
Sbjct: 355 GIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSAS 414

Query: 347 TIEDHKRSVHSARFVCEHCPKTFNSRFRLLQHMEEHDESLRNSTSVPCTICGQVMRDKYI 406
                +    +     E  P    S          +           C  C         
Sbjct: 415 DSHGDEVLYVAGSAELELPPYD-GSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPG 473

Query: 407 LTRHIKLMHTVQ 418
           LTRHI   H  +
Sbjct: 474 LTRHINKCHPSE 485



==> gnl|CDD|36291 KOG1074, KOG1074, KOG1074, Transcriptional repressor SALM
           [Transcription].
          Length = 958

 Score = 43.6 bits (102), Expect = 6e-005
 Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 8/102 (7%)

Query: 384 ESLRNSTSVP--CTICGQVMRDKYILTRHIKLMHTVQPAVSCETCGKTFKCKRNLSVHMT 441
           E+  N  + P  C IC +V+     L  H +  HT +    C+ CG+ F  K NL  HM+
Sbjct: 596 ENSENKRTDPNQCIICLRVLSCPSALQMHYR-THTGERPFKCKICGRAFTTKGNLKAHMS 654

Query: 442 NVCMEPT-----RLYPCTICGKEFRRKNKLKEHMSTHTGKPL 478
               +P            IC K+F     L +H+  H G  +
Sbjct: 655 VHKAKPPARVQFSCPSTFICQKKFTNAVTLPQHIRIHLGGQI 696



 Score = 43.6 bits (102), Expect = 7e-005
 Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 423 CETCGKTFKCKRNLSVHMTNVCMEPTRLYPCTICGKEFRRKNKLKEHMSTHTGKP-LYMC 481
           C  C +   C   L +H      E  R + C ICG+ F  K  LK HMS H  KP   + 
Sbjct: 608 CIICLRVLSCPSALQMHYRTHTGE--RPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQ 665

Query: 482 SFCPETF 488
             CP TF
Sbjct: 666 FSCPSTF 672



 Score = 39.4 bits (91), Expect = 0.001
 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 417 VQPAVSCETCGKTFKCKRNLSVHMTNVCMEPTRLYPCTICGKEFRRKNKLKEHMSTHTG 475
           V  A  C  CGK F     L +HM        + + C  C + F  +  LK HM TH  
Sbjct: 876 VNNAHVCNVCGKQFSSSAALEIHMRTHTGP--KPFFCHFCEEAFTTRGNLKVHMGTHMW 932



 Score = 36.3 bits (83), Expect = 0.010
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 6/74 (8%)

Query: 297 IQNKHQERQFCCDVCGKKFPFKKRLTVHMKKMHVEKDIICDQCQKPF-TKYTIEDHKRSV 355
           + N H      C+VCGK+F     L +HM+     K   C  C++ F T+  ++ H  + 
Sbjct: 876 VNNAHV-----CNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTH 930

Query: 356 HSARFVCEHCPKTF 369
              +      P  F
Sbjct: 931 MWVQPPSRRGPSPF 944



 Score = 35.9 bits (82), Expect = 0.011
 Identities = 17/36 (47%), Positives = 21/36 (58%)

Query: 453 CTICGKEFRRKNKLKEHMSTHTGKPLYMCSFCPETF 488
           C +CGK+F     L+ HM THTG   + C FC E F
Sbjct: 882 CNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAF 917



 Score = 35.1 bits (80), Expect = 0.024
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 4/59 (6%)

Query: 446 EPTRLYPCTICGKEFRRKNKLKEHMSTHTGKPLYMCSFCPETFRQ----DTHLYHHRKN 500
           +P   + C  C K F   + L+ H+ +HTG+  + C+ C   F        H   HR+ 
Sbjct: 349 KPFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRHREK 407



 Score = 34.7 bits (79), Expect = 0.028
 Identities = 38/199 (19%), Positives = 59/199 (29%), Gaps = 57/199 (28%)

Query: 293 MKEHIQNKHQERQFCCDVCGKKFPFKKRLTVHMKKMHVEKDIICDQCQKPFTKYTIEDHK 352
           ++ H +    ER F C +CG+ F  K  L  HM  +H  K     Q   P T        
Sbjct: 621 LQMHYRTHTGERPFKCKICGRAFTTKGNLKAHM-SVHKAKPPARVQFSCPST-------- 671

Query: 353 RSVHSARFVCEHCPKTFNSRFRLLQHMEEHDESLRNSTSVPCTICGQVMRDKYILTRHIK 412
                  F+C+     F +   L QH+  H     ++                       
Sbjct: 672 -------FICQK---KFTNAVTLPQHIRIHLGGQISNGGTAAE----------------- 704

Query: 413 LMHTVQPAVSCETCGKTFKCKRNLSVHMTNVCMEPTRL------------------YPCT 454
               +  A  C +C KTF   R+ S  ++      +                     P  
Sbjct: 705 ---GILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPEN 761

Query: 455 ICGKEFRRKNKLKEHMSTH 473
            CG+E   +  +    ST 
Sbjct: 762 SCGRELEGEMAISVRGSTE 780



 Score = 34.7 bits (79), Expect = 0.032
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 280 KYRCELCGE---KHQNMKEHIQNKHQERQFCCDVCGKKFPFKKRLTVHMKKMH 329
           K++C  C +       ++ H+++   ER F C+VCG +F  K  L VH ++  
Sbjct: 353 KHKCRFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRHR 405



 Score = 31.3 bits (70), Expect = 0.29
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 394 CTICGQVMRDKYILTRHIKLMHTVQPAVSCETCGKTFKCKRNLSVH 439
           C  C +V      L  H++  HT +    C  CG  F  K NL VH
Sbjct: 356 CRFCAKVFGSDSALQIHLR-SHTGERPFQCNVCGNRFSTKGNLKVH 400



 Score = 30.9 bits (69), Expect = 0.43
 Identities = 14/45 (31%), Positives = 20/45 (44%)

Query: 453 CTICGKEFRRKNKLKEHMSTHTGKPLYMCSFCPETFRQDTHLYHH 497
           C IC +     + L+ H  THTG+  + C  C   F    +L  H
Sbjct: 608 CIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAH 652



==> gnl|CDD|37442 KOG2231, KOG2231, KOG2231, Predicted E3 ubiquitin ligase
           [Posttranslational modification, protein turnover,
           chaperones].
          Length = 669

 Score = 33.1 bits (75), Expect = 0.079
 Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 10/73 (13%)

Query: 438 VHMTNVCMEPTRLYPCTICGKEFRRKNKLKEHMS------THTGKPLYMCSFCPETFRQD 491
           +H+ ++C++  ++       K + R       M       +  G P  +C FC E F  D
Sbjct: 140 LHLCSLCLQNLKI--FINERKLYTRAELNLHLMFGDPDDESCRGHP--LCKFCHERFLDD 195

Query: 492 THLYHHRKNAHYE 504
             LY H +  H  
Sbjct: 196 DELYRHLRFDHEF 208



==> gnl|CDD|38787 KOG3580, KOG3580, KOG3580, Tight junction proteins [Signal
           transduction mechanisms].
          Length = 1027

 Score = 32.0 bits (72), Expect = 0.21
 Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 5/106 (4%)

Query: 145 DLDPTAPSSDEDSAVPQGSRSDSSSPDRRKPKRERNPKRPQTSDNETKQSKVAAQKEEDE 204
           D+      SD   + P   RS  SS D          +     D  ++ S++ A     +
Sbjct: 298 DISEIETMSDRSFS-PPERRSQYSSYDYHSSSEHLPERPSSREDTPSRLSRMGATPTPVK 356

Query: 205 SLHNFYKRIVCEVC----DIQRMLVGEPQIDFGTWRALLRHTKEVH 246
           S  +    +V E        Q   + +P+    T+         ++
Sbjct: 357 STGDIAGTVVPETTKEPRYQQEPPLPQPKAAPRTFLRPSPEDMAIY 402



==> gnl|CDD|36361 KOG1146, KOG1146, KOG1146, Homeobox protein [General function
            prediction only].
          Length = 1406

 Score = 30.8 bits (69), Expect = 0.43
 Identities = 20/149 (13%), Positives = 35/149 (23%), Gaps = 29/149 (19%)

Query: 334  IICDQCQKPF------TKYTIEDHKRSVHSARFVCEHCPKTFNSRFRLLQHMEEHDESLR 387
            ++ +  ++PF      T            S    C    +     F +         +L 
Sbjct: 1229 LLPNALEQPFPQEPEPTATAPPKPPELPASGEGECGAVDELLTPSFGI--------STLD 1280

Query: 388  NSTSVPCTICGQVMRDKYILTRHIKLMHTVQPAVSCETCGKTFKCKRNLSVHMTNVCMEP 447
             +    C  C      +  LT H                    +           V   P
Sbjct: 1281 VTHRYLCRQCKMAFDGEAPLTAH------------QRKFCFAGRGSGGSMPPPLRV---P 1325

Query: 448  TRLYPCTICGKEFRRKNKLKEHMSTHTGK 476
               Y C  C      +  L+ HM +   +
Sbjct: 1326 DCTYHCLACEVLLSGREALQIHMRSSAHR 1354



 Score = 30.4 bits (68), Expect = 0.59
 Identities = 18/80 (22%), Positives = 28/80 (35%), Gaps = 5/80 (6%)

Query: 377 QHMEEHDESLRNSTS-----VPCTICGQVMRDKYILTRHIKLMHTVQPAVSCETCGKTFK 431
           QH  E+  S           V  T    ++  K  L     ++H+    + C  C   +K
Sbjct: 417 QHSNENTSSETKEEEDRGTLVELTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYK 476

Query: 432 CKRNLSVHMTNVCMEPTRLY 451
             + L VHM +   E    Y
Sbjct: 477 LAQTLGVHMRSKHPESQSAY 496



 Score = 30.4 bits (68), Expect = 0.60
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 3/93 (3%)

Query: 236 RALLRHTKEVHKHDKVYVKCPVCEMKMRTKQTLLQHM-DWHENPEKYRCELCGEKHQNMK 294
           R+L   T  +H   K   KCP C    +  QTL  HM   H   +   C+  G+ H  + 
Sbjct: 450 RSLEGQTVVLHSFFKTL-KCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKA-GQNHPRLA 507

Query: 295 EHIQNKHQERQFCCDVCGKKFPFKKRLTVHMKK 327
                +   + + C  C         L++H++ 
Sbjct: 508 RGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQS 540



 Score = 30.0 bits (67), Expect = 0.67
 Identities = 28/159 (17%), Positives = 44/159 (27%), Gaps = 29/159 (18%)

Query: 302 QERQFCCDVCGKKFPFKKRLTVHMKKMHVEKDIICDQCQKPFTKYTIEDHKRSVHSARFV 361
             +   C  C   +   + L VHM+  H E      +  +   +    +  R      + 
Sbjct: 462 FFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP-YP 520

Query: 362 CEHCPKTFNSRFRLLQHM----------------EEHDESLRNSTSVPCTI---CGQVMR 402
           C  C  +  +   L  H+                 E    L  S +         G    
Sbjct: 521 CRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAG 580

Query: 403 DKYILTRHIKLMHTVQPAVSCETCGKTFKCKRNLSVHMT 441
                T+         P+  CE C       RNL +HMT
Sbjct: 581 SSGPKTK---------PSWRCEVCSYETNIARNLRIHMT 610



==> gnl|CDD|35605 KOG0384, KOG0384, KOG0384, Chromodomain-helicase DNA-binding
           protein [Transcription].
          Length = 1373

 Score = 30.4 bits (68), Expect = 0.60
 Identities = 27/156 (17%), Positives = 53/156 (33%), Gaps = 17/156 (10%)

Query: 60  EFHKYYCEIEAVRQQHEHELLAIGDKQQ-----------EEVTVVCDSLEPSYRTEFFEV 108
              +   E E+  + HE + L     Q            E+V+   +S E S  +   + 
Sbjct: 26  ATEEENPENESNEEDHEPKELYQQVSQSTPKASSAIDDGEDVSSTSESEESSSDSNDDKY 85

Query: 109 KVEPFEQTDVFEQENSNCSDEKPLHCAFVKCEEPPIDLDPTAPSSDEDSAVPQGSRSDSS 168
                 +  + ++E+     +          ++   D D     S+++       R   S
Sbjct: 86  GDADDSKDPLEDEEDRGSRSKSK-----ASRDKSSSDNDGEGEDSEDEVPSRPERRQKKS 140

Query: 169 SPDRRKPKRERNPKRPQTSDNETKQSKVAAQKEEDE 204
               ++ KR R  KR  +   E + S+   + EE E
Sbjct: 141 KKRSKQTKRRRASKR-SSKRKEDEDSETDDEDEEVE 175