>AGAP007725-PA gnl|CDD|37442 KOG2231, KOG2231, KOG2231, Predicted E3 ubiquitin ... 202 1e-052 gnl|CDD|39466 KOG4265, KOG4265, KOG4265, Predicted E3 ubiquitin ... 45 5e-005 gnl|CDD|38814 KOG3608, KOG3608, KOG3608, Zn finger proteins [Gen... 44 1e-004 gnl|CDD|36174 KOG0956, KOG0956, KOG0956, PHD finger protein AF10... 41 9e-004 gnl|CDD|39476 KOG4275, KOG4275, KOG4275, Predicted E3 ubiquitin ... 40 0.001 gnl|CDD|39374 KOG4172, KOG4172, KOG4172, Predicted E3 ubiquitin ... 40 0.002 gnl|CDD|39890 KOG4692, KOG4692, KOG4692, Predicted E3 ubiquitin ... 38 0.006 gnl|CDD|36063 KOG0845, KOG0845, KOG0845, Nuclear pore complex, N... 38 0.006 gnl|CDD|38090 KOG2879, KOG2879, KOG2879, Predicted E3 ubiquitin ... 35 0.043 gnl|CDD|39355 KOG4152, KOG4152, KOG4152, Host cell transcription... 35 0.050 ==> gnl|CDD|37442 KOG2231, KOG2231, KOG2231, Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]. Length = 669 Score = 202 bits (515), Expect = 1e-052 Identities = 137/573 (23%), Positives = 214/573 (37%), Gaps = 95/573 (16%) Query: 25 CVVCFKPIVYFAIGECDHL-CCYECSTRIRVL----CQQNDCPICRRDLAKVIFSKTLTP 79 C +C + G C H C C R+R N+CP+CRR++ + Sbjct: 3 CAICAFSPDFVGRGSCGHNEVCATCVVRLRFELNNRKCSNECPVCRREVETKSNGDSSDA 62 Query: 80 --YQQLDVKNRSGLYDKKYRICFTDAEVQHAYFDLLDYKCPRCDQKN------------- 124 K ++ I F D L + C CD++ Sbjct: 63 VGTFPEGRKCDFDEHEDTCVIFFADKLTYTKLEACLHHSCHICDRRFRALYNKKECLHCT 122 Query: 125 -FPKFELLREHVRKKHELFYCDICTEHLKVFSSERRCYNRQELALHRRKGDPDKVGHRGH 183 F E L+ H+R +H+L C +C ++LK+F +ER+ Y R EL LH GDPD RGH Sbjct: 123 EFKSVENLKNHMRDQHKLHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGH 182 Query: 184 PLCEYCDTRFLDKDELFRHLRKDHFFCHYCD-ADGRNYFYGDYASLRDHFRADHFLCEEG 242 PLC++C RFLD DEL+RHLR DH FCH+CD G+N +Y DY L +HFR HFLCEE Sbjct: 183 PLCKFCHERFLDDDELYRHLRFDHEFCHFCDYKTGQNEYYNDYDDLEEHFRKGHFLCEEE 242 Query: 243 ECEQEQFTSVFRTEIDLRAHRASVHGKSMNRLANKQTRTLELEFTYAPR-SATGRSAGSG 301 C ++F F EI+L+AH R ++ E Y R S GR + Sbjct: 243 FCRTKKFYVAFELEIELKAH----------------NRFIQHEKCYICRPSRPGRPSSRY 286 Query: 302 TSGETLQHELDNLELTNDQTSKLHPKKVIDATSEQDFPTLGGSAPNPVFRPNNVTIRQRV 361 +++ D G +AP R Sbjct: 287 RGP---------------------YRRLESHFRVSDEARDGSTAPQGKGNNFGS----RR 321 Query: 362 YGTAGLARTKENFPALGSGGGETTGPTSLNEGFSSKITASSLLKPSQPTSSAGTSMMIHV 421 + LA ++ P+ +G S+ T+ + + + + + V Sbjct: 322 DEGSPLAGNRQELPSTANGNP-------------SRFTSPNSSRINAASRQIRKADPAVV 368 Query: 422 SNRPSGSSTGKSNGASVGSMIGKKNSSDFPALPGSSSKALTGSNKKLTGDVFSDMNDRSG 481 S + + S+ S I + A ++ N+ + + Sbjct: 369 GQIISLAGSSSSSSTPGRSRISPVTNRS--AAAPGAAAPYPAPNRGPGENSIKSLRR--- 423 Query: 482 NSSMVNLNAISAKHRALVDDYVSVSSVASKVTTISAKDLKKNASATVQGTVPSVHSTKAF 541 V + SA ++L D V + + V A+ + S+ + P ST++ Sbjct: 424 ----VPSSGRSAASQSLSSDRVEQTRPLASVVLQIARKAAETPSS---PSSPYNSSTRST 476 Query: 542 PSLGEGNKPGTAGGGSQTTAGSSSSKKKPMPAP 574 P ++ G + + K AP Sbjct: 477 AQ------PSSSLGPQSSLPSLKNRKSSSTSAP 503 ==> gnl|CDD|39466 KOG4265, KOG4265, KOG4265, Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]. Length = 349 Score = 45.0 bits (106), Expect = 5e-005 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Query: 25 CVVCFKPIVYFAIGECDHLC-CYECSTRIRVLCQQNDCPICRR 66 CV+C + C HLC C C+ +R Q N+CPICR+ Sbjct: 293 CVICLSESRDTVVLPCRHLCLCSGCAKSLRY--QTNNCPICRQ 333 ==> gnl|CDD|38814 KOG3608, KOG3608, KOG3608, Zn finger proteins [General function prediction only]. Length = 467 Score = 43.5 bits (102), Expect = 1e-004 Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 18/124 (14%) Query: 115 YKCPRCDQKNFPKFELLREHVRKKHELFYCDICTEHLKVFSSERRCYNRQELALH-RRKG 173 ++C +C K F +LL+ HV + + C +C + C + L H R + Sbjct: 238 FQCAQC-FKRFATEKLLKSHVVRHVNCYKCPLC---------DMTCSSASSLTTHIRYRH 287 Query: 174 DPDKVGHRGHPL-CEYCDTRFLDKDELFRHLRKDHFFCHYCDADGRNYFYGDYASLRDHF 232 DK P C+ CDTR + + +L +H++ + C+ +Y Y +R HF Sbjct: 288 SKDK------PFKCDECDTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRRHF 341 Query: 233 RADH 236 H Sbjct: 342 LEVH 345 Score = 35.8 bits (82), Expect = 0.024 Identities = 33/147 (22%), Positives = 59/147 (40%), Gaps = 24/147 (16%) Query: 131 LREHVR--KKHELFYCDICTEHLKVFSSERRCYNRQELALHRRKGDPDKVGHRGHPLCEY 188 LREH+R ++ C C E +F ++ + ++ RR+ + + C Sbjct: 195 LREHIRTHSNEKVVACPHCGE---LFRTKTKLFDHL-----RRQTELNT----NSFQCAQ 242 Query: 189 CDTRFLDKDELFRHLRK--DHFFCHYCDADGRNYFYGDYASLRDHFRADHFLCEEGECEQ 246 C RF + L H+ + + + C CD +SL H R H + +C Sbjct: 243 CFKRFATEKLLKSHVVRHVNCYKCPLCDMT-----CSSASSLTTHIRYRHSKDKPFKC-- 295 Query: 247 EQFTSVFRTEIDLRAHRASVHGKSMNR 273 ++ + E DL H VH K++ + Sbjct: 296 DECDTRCVRESDLAKH-VQVHSKTVYQ 321 Score = 32.0 bits (72), Expect = 0.37 Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 13/98 (13%) Query: 114 DYKCPRCDQKNFPKFELLREHVRKKHELFYCD--ICTEHLKVFSSERRCYNRQELALHRR 171 +KC CD + + +L + ++ C+ C ++ ++ RR + Sbjct: 292 PFKCDECDTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRRHFLE-----VHE 346 Query: 172 KGDPDKVGHRGHPLCEYCDTRFLDKDELFRHLRKDHFF 209 +P C CD F L HL K H F Sbjct: 347 GNNPILYA------CHCCDRFFTSGKSLSAHLMKKHGF 378 ==> gnl|CDD|36174 KOG0956, KOG0956, KOG0956, PHD finger protein AF10 [General function prediction only]. Length = 900 Score = 40.6 bits (94), Expect = 9e-004 Identities = 58/325 (17%), Positives = 111/325 (34%), Gaps = 31/325 (9%) Query: 376 ALGSGGGETTGPTSLNEGFSSKITASSLLKPSQPTSSAGTSMMIHVSNRPSGSSTG-KSN 434 + GS G + +G S + S + K ++ +S TS ++ S S+ S+ Sbjct: 258 SAGSASGAVVSESREAKGKKSS-SHSFVPKGTKFSSGLTTSSTSSAASSSSSPSSISGSS 316 Query: 435 GASVGSMIGKKNSSDFPALPGSSSKALTGSNKKL--TGDVFSDMNDRSGNSSMVNLNAIS 492 +S GS + +S+DF A S++ + + +V + A S Sbjct: 317 LSSSGSSL--PSSADFSAFTASATPNMDNGSSSSPSASEVPVGTHGFQQLQIQSATAAAS 374 Query: 493 AKHRALVDDYVSVSSVASKVTTISAKDLKKNASATVQGTVPSVHSTKAFPSLGEGNKPGT 552 ++++ D S S ++ T ++ K + S H G N GT Sbjct: 375 SQNQIGPGDLKSSSYPSASSLTSFMEEETKEKKNK--TSKASKHGPGR--PKGSLNGEGT 430 Query: 553 AGGGSQTTAGSSSSKKKPMPAPQLKDDTGFVNLNALTGKKSGEKMKQKDLSTVNSADTR- 611 S T++ +S++ + D+G + + L S K T S + Sbjct: 431 ESSASPTSSAASTAGLTTASRLRSP-DSGSLASSGLGMMSSTHKRPSGSAPTTPSVGSTL 489 Query: 612 ------NNNSESVSKGGG-------------GGAKDRNKEQQQKQQQHSKSNGQSSAATQ 652 ++NS S + Q+ S +S+AA Q Sbjct: 490 VLSGIYSSNSSGGSHSNASTPSMQSTPNSSAPLVSQSVSDLQRDSVADFTSALRSAAAAQ 549 Query: 653 SSPTNNNNIPSSLNSSFPVLGSSNS 677 S+ + S+++ +NS Sbjct: 550 STTQTSTLGGSNVSIPAVHEVGTNS 574 ==> gnl|CDD|39476 KOG4275, KOG4275, KOG4275, Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]. Length = 350 Score = 40.1 bits (93), Expect = 0.001 Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 7/72 (9%) Query: 2 ASKRQQTTTQEKNVSDVETTETLCVVCFKPIVYFAIGECDHLC-CYECSTRIRVLCQQND 60 R + S T LC +C EC H+ C +C R+ N+ Sbjct: 280 RVTRLYKGNDGEQHSRSLATRRLCAICMDAPRDCVFLECGHMVTCTKCGKRM------NE 333 Query: 61 CPICRRDLAKVI 72 CPICR+ + +V+ Sbjct: 334 CPICRQYIVRVV 345 ==> gnl|CDD|39374 KOG4172, KOG4172, KOG4172, Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]. Length = 62 Score = 39.6 bits (92), Expect = 0.002 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Query: 25 CVVCFKPIVYFAIGECDHLC-CYECSTRIRVLCQQNDCPICRRDLAKVI 72 C +C++ V + C H+C CY C R++ CPICR + VI Sbjct: 10 CTICYEHPVDSVLYTCGHMCMCYACGLRLKK-ALHGCCPICRAPIKDVI 57 ==> gnl|CDD|39890 KOG4692, KOG4692, KOG4692, Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]. Length = 489 Score = 37.8 bits (87), Expect = 0.006 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 2/89 (2%) Query: 1 MASKRQQTTTQEKNVSDVETTETLCVVCFKPIVYFAIGECDHLCCYECSTRIRVLCQQND 60 +S+ + + N ++ + LC +C+ + C H CY C T+ + C+ Sbjct: 401 ASSQLPERKEESFNKDLPDSEDNLCPICYAGPINAVFAPCSHRSCYGCITQHLMNCK--R 458 Query: 61 CPICRRDLAKVIFSKTLTPYQQLDVKNRS 89 C C+ + VI K + D Sbjct: 459 CFFCKTTVIDVILDKEEEEEEDDDGHKPE 487 ==> gnl|CDD|36063 KOG0845, KOG0845, KOG0845, Nuclear pore complex, Nup98 component (sc Nup145/Nup100/Nup116) [Nuclear structure, Intracellular trafficking, secretion, and vesicular transport]. Length = 903 Score = 37.8 bits (87), Expect = 0.006 Identities = 46/314 (14%), Positives = 86/314 (27%), Gaps = 22/314 (7%) Query: 362 YGTAGL-ARTKENFPALGSGGGETTGPTSLNEGFSSKITASSLLKPSQPTSSAGTSMMIH 420 Y T GL E++ A G + + G S ++S+L S+ + T+ Sbjct: 156 YTTKGLEGLRLEDYMAGKGPGFGSG--NTGLFGSSPATSSSTLFGSSKGSGFGSTANSTP 213 Query: 421 VSNRPSGSSTGKSNGASVGSMIGKKNSSDFPALPGSSSKALTGSNKKLTGDVFSDMNDRS 480 +G + G G + S NSS F +SS + + S Sbjct: 214 FGTSTTGFTPGGLFGQNNASTSNLSNSSGFGQTTTTSSTGFSFGS--------------S 259 Query: 481 GNSSMVNLNAISAKHRALVDDYVSVSSVASKVTTISAKDLKKNASATVQGTVPSVHSTKA 540 G+ + N + S+ + A +V + S + Sbjct: 260 GSFGQPSTNGNGSAGFGQSGSSFGASNTPQTTSLFGQSTTGSAAGGSVGLFGSTTASAPS 319 Query: 541 FPSLGEGNKPGTAGGGSQTTAGSSSSKKKPMPAPQLKDDTGFVNLN--ALTGKKSGEKMK 598 F + G + S T +++ + G + +G + Sbjct: 320 FGTRSSGLFGFGSLFPSSTQTQTATGTFGAFDSGTAGFGFGLSGGQFGSTSGGGPFQSTA 379 Query: 599 QKDLSTVNSADTRNNNSESVSKG-GGGGAKDRNKEQQQKQ--QQHSKSNGQSSAATQSSP 655 + G GG + G +A++ Sbjct: 380 SGTSGGGGPGQATTSAPLGFGGGPAPGGLAGATGGLFGSAFPGTQGNTFGNGTASSTPLF 439 Query: 656 TNNNNIPSSLNSSF 669 N + P+S S F Sbjct: 440 GNGLSGPASAESLF 453 ==> gnl|CDD|38090 KOG2879, KOG2879, KOG2879, Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]. Length = 298 Score = 35.0 bits (80), Expect = 0.043 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 16 SDVETTETLCVVCFK-PIVYFAIGECDHLCCYECSTRIRVLCQQNDCPIC 64 S T++T C VC + P + IG+C H+ CY C R+ CP+C Sbjct: 233 SSTGTSDTECPVCGEPPTIPHVIGKCGHIYCYYCIATSRLWDASFTCPLC 282 ==> gnl|CDD|39355 KOG4152, KOG4152, KOG4152, Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning, Transcription]. Length = 830 Score = 34.7 bits (79), Expect = 0.050 Identities = 53/310 (17%), Positives = 93/310 (30%), Gaps = 19/310 (6%) Query: 408 QPTSSAGTSMMIHVSNRPSGSSTGKSNGASVGSMIGK---KNSSDFPALPGSSSKALTGS 464 QP + G +++ + P ++T + GS I + PA+ + + + + Sbjct: 423 QPLTQVGITLLPQAAPAPPTTTTTEQLPTKPGSSISVPTAARTQGVPAVLKVTMRPASQA 482 Query: 465 NKKLTGDVFSDMNDRSG--NSSMVNLNAISAKHRALVDDYVSVSSVASKVTTISAKDLKK 522 K V S S S M L A +A + + + TTI Sbjct: 483 GK-APVTVTSLPAIGSSPQMSGMAALAAAAAATQKIPPETRPTVLSVPAGTTIVKTMAVT 541 Query: 523 NASATVQGTVPSVHSTKAFPSLGEGN-KPGTAGGGSQTTAGSSSSKKKPMPAPQLKDDTG 581 S+T+ TV S + E + K A T+ SS + P + Sbjct: 542 PGSSTLPATVKDESSLVMVSNPAERDLKTAAAQ---VGTSVSSETNTSTRPIITVHKSGT 598 Query: 582 FVNLNALTGKKSGEKMKQKDLSTVNSADTRNNNSESVSKGGGGGAKDRNKEQQQKQQQHS 641 + K ++ V + S +S G + + K + Sbjct: 599 VTVAQQAQVVTTVVGGVTKTITLVKQPISLPGGSALISNLGKVMSVVQTKPVKTSLVTGQ 658 Query: 642 KSNGQSSAATQSSPTNNNNIPSSLNSSFPVLGSSNSVHFALAAGPKRTPPGFENVNLKRM 701 + +A P + I L + P A R E ++L Sbjct: 659 AYRFRVTAINGKGPGPASTI-LKLKTCAP--------GKPTAPSGARIKKTIEGISLVWE 709 Query: 702 PGPPPGFGNV 711 P PG G + Sbjct: 710 PPTKPGSGTI 719