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Oligonucleotide Probes Specific for HSV-2 Transcripts

Name Location
(5'-3')
HG52
G+C HSV-1
equivalent
UL1 9597-9665 56 U1
UL2 10861-10935 60
UL3 11693-11767 56 U3
UL4 12022-11948 57 U4-5'
UL5 12849-12775 59 UL4/5
UL6 16698-16772 55 UL6/7
UL7 18080-18154 55 UL8/9
UL8 18587-18513 71 UL8-5'
UL9 23010-22936 61
UL10 24529-24603 68 U10
UL11 25027-24953 57
UL12 25554-25480 57
UL13 27470-27396 61
UL14 28438-28364 63
UL15 34569-34643 59 U15
UL16 31002-30928 60 U16/17
UL17 31557-31483 61
UL18 35963-35889 67
UL19 38721-38647 61 U19-5'
UL20 41451-41377 60
UL21 43172-43246 73 U21
UL22 44241-44167 60 U22
UL23 47730-47656 65 U23
UL24 48157-48231 57 U24
UL25 49037-49111 61 U25
UL26 51710-51784 63
UL27 53565-53491 61 U27-5'
UL28 56541-56467 56 U27/8
UL29 59885-59811 59 U29
UL30 64574-64648 56 U30
UL31 67098-67024 59
UL32 69149-69075 61
UL33 69958-70022 65
UL34 70489-70563 71
UL35 71281-71355 68 U35
UL36 76005-75931 67 U36
UL37 81567-81493 63 U37
UL38 85711-85715 71 U38
UL39 89303-89377 59 U39-5'
UL40 91480-91554 61 U39/40
UL41 92074-92000 55 U41
UL42 93858-93932 64 U42
UL43 96386-96460 63 U43
UL44 98347-98421 68 U44-5'
UL45 99020-99094 57 U44/45
UL46 99447-99373 61 U46/47
UL47 101832-101758 65
UL48 105596-105522 61 U48
UL49 106499-106425 63 U49
UL49.5 107597-107523 56
UL50 108738-108812 64 U50
UL51 109506-109432 64 U51
UL52 112250-112354 59 U52-5'
UL53 113964-114038 63 U52/53
UL54 116053-116127 49 U54f
UL55 116692-116766 57 U55
UL56 117497-117423 63 U56
LAT 5' end 119544-119618 71 RLAT-5'
LAT intron 120761-120835 63 RLAT-I
ICP0 124126-124052 57 RICP0
ICP34.5 125697-125622 67 RICP34.5
ORFOP 125090-125164 61 ROP
LAT-3' 127878-127940 73 RLAT-3'
ICP4 131370-131296 71 RICP4
US1/ICP22 134549-134623 64 R/S22
US3 137305-137379 61 US3-5'
US4 139752-139826 61 US3/4
US5 140507-140581 64 US5-5'
US6 141347-141421 56
US7 143348-143423 65 US5/6/7
US8 144493-144567 59 US8-5'
US8a 145339-145413 57 N/A
US9 146062-146136 60 US8/9
US10 147063-146989 67 US10/11/12
US11 147699-147625 67
US12 148035-147961 55